Rainer Spang
Orcid: 0000-0002-1326-4297
According to our database1,
Rainer Spang
authored at least 46 papers
between 1998 and 2024.
Collaborative distances:
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Bibliography
2024
2023
2022
2021
Differentiated uniformization: A new method for inferring Markov chains on combinatorial state spaces including stochastic epidemic models.
CoRR, 2021
2020
Low-rank tensor methods for Markov chains with applications to tumor progression models.
CoRR, 2020
2018
Proceedings of the Research in Computational Molecular Biology, 2018
2017
Bioinform., 2017
2016
Analyzing synergistic and non-synergistic interactions in signalling pathways using Boolean Nested Effect Models.
Bioinform., 2016
2015
Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma.
PLoS Comput. Biol., 2015
A statistical approach to virtual cellular experiments: improved causal discovery using accumulation IDA (aIDA).
Bioinform., 2015
2014
Exact likelihood computation in Boolean networks with probabilistic time delays, and its application in signal network reconstruction.
Bioinform., 2014
2013
Considering Unknown Unknowns: Reconstruction of Nonconfoundable Causal Relations in Biological Networks.
J. Comput. Biol., 2013
Considering Unknown Unknowns - Reconstruction of Non-confoundable Causal Relations in Biological Networks.
Proceedings of the Research in Computational Molecular Biology, 2013
2011
Bioinform., 2011
2009
ReseqChip: Automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly.
BMC Bioinform., 2009
2008
Microarray Based Diagnosis Profits from Better Documentation of Gene Expression Signatures.
PLoS Comput. Biol., 2008
Detecting hierarchical structure in molecular characteristics of disease using transitive approximations of directed graphs.
Bioinform., 2008
Analyzing gene perturbation screens with nested effects models in R and bioconductor.
Bioinform., 2008
2007
Compensating for Unknown Confounders in Microarray Data Analysis Using Filtered Permutations.
J. Comput. Biol., 2007
Annotation-based distance measures for patient subgroup discovery in clinical microarray studies.
Bioinform., 2007
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007
2006
Automated in-silico detection of cell populations in flow cytometry readouts and its application to leukemia disease monitoring.
BMC Bioinform., 2006
<i>OrderedList</i> - a bioconductor package for detecting similarity in ordered gene lists.
Bioinform., 2006
Permutation Filtering: A Novel Concept for Significance Analysis of Large-Scale Genomic Data.
Proceedings of the Research in Computational Molecular Biology, 2006
2005
stam - a Bioconductor compliant R package for structured analysis of microarray data.
BMC Bioinform., 2005
Bioinform., 2005
Non-transcriptional pathway features reconstructed from secondary effects of RNA interference.
Bioinform., 2005
Molecular decomposition of complex clinical phenotypes using biologically structured analysis of microarray data.
Bioinform., 2005
Proceedings of the Tenth International Workshop on Artificial Intelligence and Statistics, 2005
2004
A Stochastic Downhill Search Algorithm for Estimating the Local False Discovery Rate.
IEEE ACM Trans. Comput. Biol. Bioinform., 2004
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004
2002
J. Comput. Biol., 2002
Silico Biol., 2002
2001
Sequence Database Search Using Jumping Alignments.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001
2000
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, 2000
1999
A new method for modeling protein evolution.
Proceedings of the German Conference on Bioinformatics, 1999
1998