Robert W. Cottingham

According to our database, Robert W. Cottingham authored at least 11 papers between 1996 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

CORE: Comparable, Open, Reliable, Extensible Software: An Experience Report of Four Flux Balance Analysis Tools.

Alexis L. Marsh, Myra B. Cohen, Robert W. Cottingham

Proceedings of the 14th ACM International Conference on Bioinformatics, 2023

2021

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes (Corrigendum).

Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry

Nucleic Acids Res., 2021

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.

Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry

Nucleic Acids Res., 2021

2018

Navigating the maze: the impact of configurability in bioinformatics software.

Mikaela Cashman, Myra B. Cohen, Priya Ranjan, Robert W. Cottingham

Proceedings of the 33rd ACM/IEEE International Conference on Automated Software Engineering, 2018

2014

The DOE systems biology knowledgebase (KBase): progress towards a system for collaborative and reproducible inference and modeling of biological function.

Robert W. Cottingham

Proceedings of the 5th ACM Conference on Bioinformatics, 2014

2011

Scenario driven data modelling: a method for integrating diverse sources of data and data streams.

Shelton D. Griffith, Daniel Quest, Thomas S. Brettin, Robert W. Cottingham

BMC Bioinform., 2011

2010

Next generation models for storage and representation of microbial biological annotation.

Daniel Quest, Miriam L. Land, Thomas S. Brettin, Robert W. Cottingham

BMC Bioinform., 2010

2000

Mouse-human Comparative Map Resources on the Web.

Beth K. Gatewood, Robert W. Cottingham

Briefings Bioinform., 2000

1998

GDB: the Human Genome Database.

Stanley Letovsky, Robert W. Cottingham, Christopher J. Porter, Peter W. D. Li

Nucleic Acids Res., 1998

1997

The GDB Human Genome Database Anno 1997.

Kenneth H. Fasman, Stanley Letovsky, Peter W. D. Li, Robert W. Cottingham, David T. Kingsbury

Nucleic Acids Res., 1997

1996

Improvements to the GDB Human Genome Data Base.

Kenneth H. Fasman, Stanley Letovsky, Robert W. Cottingham, David T. Kingsbury

Nucleic Acids Res., 1996