Filipe Liu

According to our database, Filipe Liu authored at least 7 papers between 2014 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

<i>TranSyT</i>, an innovative framework for identifying transport systems.

Emanuel Cunha, Davide Lagoa, José P. Faria, Filipe Liu, Christopher S. Henry, Oscar Días

Bioinform., August, 2023

2021

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes (Corrigendum).

Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry

Nucleic Acids Res., 2021

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.

Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry

Nucleic Acids Res., 2021

2019

A Model Integration Pipeline for the Improvement of Human Genome-Scale Metabolic Reconstructions.

Vítor Vieira, Jorge Ferreira, Rúben Rodrigues, Filipe Liu, Miguel Rocha

J. Integr. Bioinform., 2019

2018

Evaluation and development of algorithms and computational tools for metabolic pathway optimization

Filipe Liu

PhD thesis, 2018

2015

Development and application of efficient pathway enumeration algorithms for metabolic engineering applications.

Filipe Liu, Paulo Vilaça, Isabel Rocha, Miguel Rocha

Comput. Methods Programs Biomed., 2015

2014

Evaluating Pathway Enumeration Algorithms in Metabolic Engineering Case Studies.

Filipe Liu, Paulo Vilaça, Isabel Rocha, Miguel Rocha

Proceedings of the 8th International Conference on Practical Applications of Computational Biology & Bioinformatics, 2014