Roger D. Kouyos

According to our database, Roger D. Kouyos authored at least 15 papers between 2009 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Unsupervised machine learning predicts future sexual behaviour and sexually transmitted infections among HIV-positive men who have sex with men.

Sara Andresen, Suraj Balakrishna, Catrina Mugglin, Axel J. Schmidt, Dominique L. Braun, Alex Marzel, Thanh Doco Lecompte, Katharine Ea Darling, Jan A. Roth, Patrick Schmid, Enos Bernasconi, Huldrych F. Günthard, Andri Rauch, Roger D. Kouyos, Luisa Salazar-Vizcaya

PLoS Comput. Biol., October, 2022

2021

Assessing the potential impact of transmission during prolonged viral shedding on the effect of lockdown relaxation on COVID-19.

Burcu Tepekule, Anthony Hauser, Viacheslav N. Kachalov, Sara Andresen, Thomas Scheier, Peter W. Schreiber, Huldrych F. Günthard, Roger D. Kouyos

PLoS Comput. Biol., 2021

Comparing mutational pathways to lopinavir resistance in HIV-1 subtypes B versus C.

Susana Posada-Céspedes, Gert van Zyl, Hesam Montazeri, Jack Kuipers, Soo-Yon Rhee, Roger D. Kouyos, Huldrych F. Günthard, Niko Beerenwinkel

PLoS Comput. Biol., 2021

Identifying the drivers of multidrug-resistant Klebsiella pneumoniae at a European level.

Viacheslav N. Kachalov, Huyen Nguyen, Suraj Balakrishna, Luisa Salazar-Vizcaya, Rami Sommerstein, Stefan P. Kuster, Anthony Hauser, Pia Abel zur Wiesch, Eili Y. Klein, Roger D. Kouyos

PLoS Comput. Biol., 2021

Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study.

Suraj Balakrishna, Luisa Salazar-Vizcaya, Axel J. Schmidt, Viacheslav N. Kachalov, Katharina Kusejko, Maria Christine Thurnheer, Jan A. Roth, Dunja Nicca, Matthias Cavassini, Manuel Battegay, Patrick Schmid, Enos Bernasconi, Huldrych F. Günthard, Andri Rauch, Roger D. Kouyos, The Swiss Hiv Cohort Study

PLoS Comput. Biol., 2021

2019

Bridging the gap between HIV epidemiology and antiretroviral resistance evolution: Modelling the spread of resistance in South Africa.

Anthony Hauser, Katharina Kusejko, Leigh F. Johnson, Gilles Wandeler, Julien Riou, Fardo Goldstein, Matthias Egger, Roger D. Kouyos

PLoS Comput. Biol., 2019

2017

Phylodynamics on local sexual contact networks.

David A. Rasmussen, Roger D. Kouyos, Huldrych F. Günthard, Tanja Stadler

PLoS Comput. Biol., 2017

2016

The Role of Adherence and Retreatment in <i>De Novo</i> Emergence of MDR-TB.

Dominique Cadosch, Pia Abel zur Wiesch, Roger D. Kouyos, Sebastian Bonhoeffer

PLoS Comput. Biol., 2016

Large-scale inference of conjunctive Bayesian networks.

Hesam Montazeri, Jack Kuipers, Roger D. Kouyos, Jürg Böni, Sabine Yerly, Thomas Klimkait, Vincent Aubert, Huldrych F. Günthard, Niko Beerenwinkel, The Swiss Hiv Cohort Study

Bioinform., 2016

2012

Estimating the Fitness Cost of Escape from HLA Presentation in HIV-1 Protease and Reverse Transcriptase.

Rafal Mostowy, Roger D. Kouyos, Ilka Hoof, Trevor Hinkley, Mojgan Haddad, Jeannette M. Whitcomb, Christos J. Petropoulos, Can Kesmir, Sebastian Bonhoeffer

PLoS Comput. Biol., 2012

Inferring Epidemic Contact Structure from Phylogenetic Trees.

Gabriel E. Leventhal, Roger D. Kouyos, Tanja Stadler, Viktor von Wyl, Sabine Yerly, Jürg Böni, Cristina Cellerai, Thomas Klimkait, Huldrych F. Günthard, Sebastian Bonhoeffer

PLoS Comput. Biol., 2012

2011

Informed Switching Strongly Decreases the Prevalence of Antibiotic Resistance in Hospital Wards.

Roger D. Kouyos, Pia Abel zur Wiesch, Sebastian Bonhoeffer

PLoS Comput. Biol., 2011

2010

Similar Impact of CD8+ T Cell Responses on Early Virus Dynamics during SIV Infections of Rhesus Macaques and Sooty Mangabeys.

Roger D. Kouyos, Shari N. Gordon, Silvija I. Staprans, Guido Silvestri, Roland R. Regoes

PLoS Comput. Biol., 2010

Evolution of Recombination on an HIV-1 Derived Fitness Landscape.

João Martins, Roger D. Kouyos, Trevor Hinkley, Colombe Chappey, Mojgan Haddad, Jeannette M. Whitcomb, Christos J. Petropoulos, Sebastian Bonhoeffer

Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

2009

Predicting the Evolution of Sex on Complex Fitness Landscapes.

Dusan Misevic, Roger D. Kouyos, Sebastian Bonhoeffer

PLoS Comput. Biol., 2009