Russell Bowler

According to our database, Russell Bowler authored at least 18 papers between 2014 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

BioNeuralNet: A Graph Neural Network based Multi-Omics Network Data Analysis Tool.

Vicente Ramos, Sundous Hussein, Mohamed Abdel-Hafiz, Arunangshu Sarkar, Weixuan Liu, Katerina J. Kechris, Russell P. Bowler, Leslie Lange, Farnoush Banaei Kashani

CoRR, July, 2025

A statistical framework for multi-trait rare variant analysis in large-scale whole-genome sequencing studies.

Xihao Li, Han Chen, Margaret Sunitha Selvaraj, Eric Van Buren, Hufeng Zhou, Yuxuan Wang, Ryan Sun, Zachary R. McCaw, Zhi Yu, Min-Zhi Jiang, Daniel DiCorpo, Sheila M. Gaynor, Rounak Dey, Donna K. Arnett, Emelia J. Benjamin, Joshua C. Bis, John Blangero, Eric Boerwinkle, Donald W. Bowden, Jennifer A. Brody, Brian E. Cade, April P. Carson, Jenna C. Carlson, Nathalie Chami, Yii-Der Ida Chen, Joanne E. Curran, Paul S. de Vries, Myriam Fornage, Nora Franceschini, Barry I. Freedman, Charles Gu, Nancy L. Heard-Costa, Jiang He, Lifang Hou, Yi-Jen Hung, Marguerite R. Irvin, Robert C. Kaplan, Sharon L. R. Kardia, Tanika N. Kelly, Iain R. Konigsberg, Charles L. Kooperberg, Brian G. Kral, Changwei Li, Yun Li, Honghuang Lin, Ching-Ti Liu, Ruth J. F. Loos, Michael C. Mahaney, Lisa W. Martin, Rasika A. Mathias, Braxton D. Mitchell, May E. Montasser, Alanna C. Morrison, Take Naseri, Kari E. North, Nicholette D. Palmer, Patricia A. Peyser, Bruce M. Psaty, Susan Redline, Alexander P. Reiner, Stephen S. Rich, Colleen M. Sitlani, Jennifer A. Smith, Kent D. Taylor, Hemant K. Tiwari, Ramachandran S. Vasan, Satupa'itea Viali, Zhe Wang, Jennifer Wessel, Lisa R. Yanek, Bing Yu, Namiko Abe, Gonçalo R. Abecasis, François Aguet, Christine M. Albert, Laura Almasy, Alvaro Alonso, Seth A. Ament, Peter Anderson, Pramod Anugu, Deborah Applebaum-Bowden, Kristin G. Ardlie, Dan E. Arking, Allison Ashley-Koch, Stella Aslibekyan, Themistocles L. Assimes, Dimitrios Avramopoulos, Najib Ayas, Adithya Balasubramanian, John Barnard, Kathleen C. Barnes, R. Graham Barr, Emily Barron-Casella, Lucas Barwick, Terri H. Beaty, Gerald Beck, Diane Becker, Lewis Becker, Rebecca Beer, Amber Beitelshees, Takis Benos, Marcos Bezerra, Larry Bielak, Thomas W. Blackwell, Nathan Blue, Russell Bowler, Ulrich Broeckel, Jai G. Broome, Deborah Brown, Karen A. Bunting, Esteban Gonzàlez Burchard, Carlos Bustamante, Erin Buth, Jonathan Cardwell, Vincent J. Carey, Julie Carrier, Cara L. Carty, Richard Casaburi, Juan P. Casas Romero, James F. Casella, Peter J. Castaldi, Mark Chaffin, Christy Chang, Yi-Cheng Chang, Daniel Chasman, Sameer Chavan, Bo-Juen Chen, Wei-Min Chen, Michael H. Cho, Seung Hoan Choi, Lee-Ming Chuang, Mina K. Chung, Ren-Hua Chung, Clary Clish, Suzy Comhair, Matthew P. Conomos, Elaine Cornell, Adolfo Correa, Carolyn Crandall, James D. Crapo, L. Adrienne Cupples, Jeffrey Curtis, Brian Custer, Coleen Damcott, Dawood Darbar, Sean David, Colleen Davis, Michelle Daya, Michael R. DeBaun, Dawn L. DeMeo, Ranjan Deka, Scott Devine, Huyen Dinh, Harsha Doddapaneni, Qing Duan, Shannon Dugan-Perez, Ravi Duggirala, Jon Peter Durda, Susan K. Dutcher, Charles B. Eaton, Lynette Ekunwe, Adel El Boueiz, Patrick T. Ellinor, Leslie Emery, Serpil Erzurum, Charles R. Farber, Jesse Farek, Tasha Fingerlin, Matthew Flickinger, Chris Frazar, Mao Fu, Stephanie M. Fullerton, Lucinda Fulton, Stacey Gabriel, Weiniu Gan, Shanshan Gao, Yan Gao, Margery Gass, Heather Geiger, Bruce D. Gelb, Mark W. Geraci, Soren Germer, Robert E. Gerszten, Auyon Ghosh, Richard A. Gibbs, Christopher Gignoux, Mark Gladwin, David C. Glahn, Stephanie M. Gogarten, Da-Wei Gong, Harald H. Göring, Sharon Graw, Kathryn J. Gray, Daniel Grine, Colin Gross, Yue Guan, Xiuqing Guo, Namrata Gupta, Jeffrey Haessler, Michael Hall, Yi Han, Patrick Hanly, Daniel Harris, Nicola L. Hawley, Benjamin D. Heavner, Susan R. Heckbert, Ryan D. Hernandez, David M. Herrington, Craig P. Hersh, Bertha Hidalgo, James E. Hixson, Brian Hobbs, John E. Hokanson, Elliott Hong, Karin Hoth, Chao Agnes Hsiung, Jianhong Hu, Haley Huston, Chii Min Hwu, Rebecca Jackson, Deepti Jain, Cashell Jaquish, Jill Johnsen, Andrew Johnson, Craig Johnson, Rich Johnston, Kimberly Jones, Hyun Min Kang, Shannon Kelly, Eimear Kenny, Michael D. Kessler, Alyna Khan, Ziad Khan, Wonji Kim, John Kimoff, Greg Kinney, Barbara Konkle, Holly Kramer, Christoph Lange, Ethan M. Lange, Leslie Lange, Cathy C. Laurie, Cecelia A. Laurie, Meryl LeBoff, Jonathon LeFaive, Jiwon Lee, Sandra Lee, Wen-Jane Lee, David Levine, Daniel Levy, Joshua Lewis, Xiaohui Li, Henry Lin, Simin Liu, Yongmei Liu, Yu Liu, Steven A. Lubitz, Kathryn L. Lunetta, James Luo, Ulysses J. Magalang, Barry Make, Ani Manichaikul, JoAnn E. Manson, Melissa Marton, Susan Mathai, Susanne May, Patrick McArdle, Merry-Lynn McDonald, Sean McFarland, Stephen McGarvey, Daniel McGoldrick, Caitlin P. McHugh, Becky McNeil, Hao Mei, Vipin Menon, Luisa Mestroni, Ginger Metcalf, Deborah A. Meyers, Emmanuel Mignot, Julie Mikulla, Nancy Min, Mollie Minear, Ryan L. Minster, Matt Moll, Zeineen Momin, Courtney Montgomery, Donna Muzny, Josyf C. Mychaleckyj, Girish N. Nadkarni, Rakhi Naik, Sergei Nekhai, Sarah C. Nelson, Bonnie Neltner, Caitlin Nessner, Deborah A. Nickerson, Osuji Nkechinyere, Jeffrey R. O'Connell, Tim O'Connor, Heather Ochs-Balcom, Geoffrey Okwuonu, Allan Pack, David T. Paik, James S. Pankow, George J. Papanicolaou, Cora Parker, Juan Manuel Peralta, Marco Perez, James Perry, Ulrike Peters, Lawrence S. Phillips, Jacob Pleiness, Toni Pollin, Wendy Post, Julia Powers Becker, Meher Preethi Boorgula, Michael Preuss, Pankaj Qasba, Dandi Qiao, Zhaohui Qin, Nicholas Rafaels, Mahitha Rajendran, D. C. Rao, Laura Rasmussen-Torvik, Aakrosh Ratan, Robert Reed, Catherine Reeves, Elizabeth A. Regan, Muagututi'a Sefuiva Reupena, Rébecca Robillard, Nicolas Robine, Dan M. Roden, Carolina Roselli, Ingo Ruczinski, Alexi Runnels, Pamela H. Russell, Sarah Ruuska, Kathleen Ryan, Ester Cerdeira Sabino, Danish Saleheen, Shabnam Salimi, Sejal Salvi, Steven Salzberg, Kevin Sandow, Vijay G. Sankaran, Jireh Santibanez, Karen Schwander, David Schwartz, Frank C. Sciurba, Christine E. Seidman, Jonathan Seidman, Vivien Sheehan, Stephanie L. Sherman, Amol Shetty, Aniket Shetty, Wayne Hui-Heng Sheu, M. Benjamin Shoemaker, Brian Silver, Edwin K. Silverman, Robert Skomro, Albert Vernon Smith, Josh Smith, Nicholas Smith, Tanja Smith, Sylvia Smoller, Beverly M. Snively, Michael Snyder, Tamar Sofer, Nona Sotoodehnia, Adrienne M. Stilp, Garrett Storm, Elizabeth Streeten, Jessica Lasky-Su, Yun Ju Sung, Jody Sylvia, Adam Szpiro, Frédéric Sériès, Daniel Taliun, Hua Tang, Margaret Taub, Matthew Taylor, Simeon Taylor, Marilyn Telen, Timothy A. Thornton, Machiko Threlkeld, Lesley Tinker, David Tirschwell, Sarah Tishkoff, Catherine Tong, Russell Tracy, Michael Tsai, Dhananjay Vaidya, David J. Van Den Berg, Peter VandeHaar, Scott Vrieze, Tarik Walker, Robert Wallace, Avram Walts, Fei-Fei Wang, Heming Wang, Jiongming Wang, Karol E. Watson, Jennifer Watt, Daniel E. Weeks, Joshua Weinstock, Bruce Weir, Scott T. Weiss, Lu-Chen Weng, Cristen J. Willer, Kayleen Williams, L. Keoki Williams, Scott Williams, Carla Wilson, James Wilson, Lara Winterkorn, Quenna Wong, Baojun Wu, Joseph Wu, Huichun Xu, Ivana Yang, Ketian Yu, Seyedeh Maryam Zekavat, Yingze Zhang, Snow Xueyan Zhao, Wei Zhao, Xiaofeng Zhu, Elad Ziv, Michael C. Zody, Sebastian Zöllner, Mariza de Andrade, Lisa de las Fuentes, Josée Dupuis, James B. Meigs, Paul L. Auer, Laura M. Raffield, Alisa K. Manning, Kenneth M. Rice, Jerome I. Rotter, Gina M. Peloso, Pradeep Natarajan, Zilin Li, Zhonghua Liu, Xihong Lin

Nat. Comput. Sci., February, 2025

A generalized higher-order correlation analysis framework for multi-omics network inference.

Weixuan Liu, Katherine A. Pratte, Peter J. Castaldi, Craig P. Hersh, Russell P. Bowler, Farnoush Banaei Kashani, Katerina J. Kechris

PLoS Comput. Biol., 2025

2024

PathIntegrate: Multivariate modelling approaches for pathway-based multi-omics data integration.

Cecilia Wieder, Juliette Cooke, Clément Frainay, Nathalie Poupin, Russell Bowler, Fabien Jourdan, Katerina J. Kechris, Rachel P. J. Lai, Timothy M. D. Ebbels

PLoS Comput. Biol., 2024

HIP: a method for high-dimensional multi-view data integration and prediction accounting for subgroup heterogeneity.

Jessica Butts, Leif Verace, Christine Wendt, Russell P. Bowler, Craig P. Hersh, Qi Long, Lynn E. Eberly, Sandra E. Safo

Briefings Bioinform., 2024

Learning from Multi-Omics Networks to Enhance Disease Prediction: An Optimized Network Embedding and Fusion Approach.

Sundous Hussein, Vicente Ramos, Weixuan Liu, Katerina J. Kechris, Leslie Lange, Russell P. Bowler, Farnoush Banaei Kashani

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023

TreeKernel: interpretable kernel machine tests for interactions between -omics and clinical predictors with applications to metabolomics and COPD phenotypes.

Charlie M. Carpenter, Lucas A. Gillenwater, Russell Bowler, Katerina J. Kechris, Debashis Ghosh

BMC Bioinform., December, 2023

NetSHy: network summarization via a hybrid approach leveraging topological properties.

Thao Vu, Elizabeth Litkowski, Weixuan Liu, Katherine A. Pratte, Leslie Lange, Russell Bowler, Farnoush Banaei Kashani, Katerina J. Kechris

Bioinform., January, 2023

2022

Significant Subgraph Detection in Multi-omics Networks for Disease Pathway Identification.

Mohamed Abdel-Hafiz, Mesbah Najafi, Shahab Helmi, Katherine A. Pratte, Yonghua Zhuang, Weixuan Liu, Katerina J. Kechris, Russell Bowler, Leslie Lange, Farnoush Banaei Kashani

Frontiers Big Data, 2022

sJIVE: Supervised joint and individual variation explained.

Elise F. Palzer, Christine Wendt, Russell Bowler, Craig P. Hersh, Sandra E. Safo, Eric F. Lock

Comput. Stat. Data Anal., 2022

Semi-supervised Embedding for Scalable and Accurate Time Series Clustering.

Andrew Hill, Russell Bowler, Katerina J. Kechris, Farnoush Banaei Kashani

Proceedings of the IEEE International Conference on Big Data, 2022

Effective Subject Representation based on Multi-omics Disease Networks using Graph Embedding.

Sundous Hussein, Thao Vu, Leslie Lange, Russell Bowler, Katerina J. Kechris, Farnoush Banaei Kashani

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Improved prediction of smoking status via isoform-aware RNA-seq deep learning models.

Zifeng Wang, Aria Masoomi, Zhonghui Xu, Adel Boueiz, Sool Lee, Tingting Zhao, Russell Bowler, Michael H. Cho, Edwin K. Silverman, Craig P. Hersh, Jennifer G. Dy, Peter J. Castaldi

PLoS Comput. Biol., 2021

PaIRKAT: A pathway integrated regression-based kernel association test with applications to metabolomics and COPD phenotypes.

Charlie M. Carpenter, Weiming Zhang, Lucas A. Gillenwater, Cameron Severn, Tusharkanti Ghosh, Russell Bowler, Katerina J. Kechris, Debashis Ghosh

PLoS Comput. Biol., 2021

2019

The Utility of Shapelets for Analyzing Physical Activity of COPD Patients and non-COPD controls.

Yuan An, Siling Chen, Nicholas Locantore, Matthew Allinder, Divya Mohan, Russell Bowler

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2017

The discordant method: a novel approach for differential correlation.

Charlotte Siska, Russell Bowler, Katerina J. Kechris

Bioinform., 2017

2014

Analyzing networks of phenotypes in complex diseases: methodology and applications in COPD.

Jen-hwa Chu, Craig P. Hersh, Peter J. Castaldi, Michael H. Cho, Benjamin A. Raby, Nan M. Laird, Russell Bowler, Stephen I. Rennard, Joseph Loscalzo, John Quackenbush, Edwin K. Silverman

BMC Syst. Biol., 2014

MSPrep - Summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data.

Grant Hughes, Charmion Cruickshank-Quinn, Richard Reisdorph, Sharon Lutz, Irina Petrache, Nichole Reisdorph, Russell Bowler, Katerina J. Kechris

Bioinform., 2014