Timothy M. D. Ebbels

Orcid: 0000-0002-3372-8423

Affiliations:
  • Imperial College London, UK


According to our database1, Timothy M. D. Ebbels authored at least 23 papers between 2006 and 2024.

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Timeline

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Bibliography

2024
LAVASET: Latent Variable Stochastic Ensemble of Trees. An ensemble method for correlated datasets with spatial, spectral, and temporal dependencies.
Bioinform., March, 2024

Genome scale metabolic network modelling for metabolic profile predictions.
PLoS Comput. Biol., February, 2024

2022
Computational Metabolomics: From Spectra to Knowledge (Dagstuhl Seminar 22181).
Dagstuhl Reports, 2022

Single sample pathway analysis in metabolomics: performance evaluation and application.
BMC Bioinform., 2022

2021
Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis.
PLoS Comput. Biol., 2021

Multiple-testing correction in metabolome-wide association studies.
BMC Bioinform., 2021

2020
Integrative analysis of time course metabolic data and biomarker discovery.
BMC Bioinform., 2020

Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection.
Bioinform., 2020

2019
Metabolomics in the Cloud: Scaling Computational Tools to Big Data.
CoRR, 2019

Predictive modelling using pathway scores: robustness and significance of pathway collections.
BMC Bioinform., 2019

2017
The future of metabolomics in ELIXIR.
F1000Research, 2017

2015
Over-representation of correlation analysis (ORCA): a method for identifying associations between variable sets.
Bioinform., 2015

diXa: a data infrastructure for chemical safety assessment.
Bioinform., 2015

2012
BATMAN - an R package for the automated quantification of metabolites from nuclear magnetic resonance spectra using a Bayesian model.
Bioinform., 2012

2011
Consensus-Phenotype Integration of Transcriptomic and Metabolomic Data Implies a Role for Metabolism in the Chemosensitivity of Tumour Cells.
PLoS Comput. Biol., 2011

Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.
Bioinform., 2011

A statistical framework for biomarker discovery in metabolomic time course data.
Bioinform., 2011

2010
Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis.
BMC Syst. Biol., 2010

MetAssimulo: Simulation of Realistic NMR Metabolic Profiles.
BMC Bioinform., 2010

Correction of mass calibration gaps in liquid chromatography-mass spectrometry metabolomics data.
Bioinform., 2010

2009
Genetic algorithms for simultaneous variable and sample selection in metabonomics.
Bioinform., 2009

2008
Piecewise multivariate modelling of sequential metabolic profiling data.
BMC Bioinform., 2008

2006
<i>springScape</i>: visualisation of microarray and contextual bioinformatic data using spring embedding and an "information landscape".
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006


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