S. Banu Ozkan

According to our database, S. Banu Ozkan authored at least 11 papers between 2004 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Topological metrics as evolutionary and dynamical descriptors of conformational landscapes within protein families.

Nikhil Ramesh, S. Banu Ozkan, Eleni Panagiotou

PLoS Comput. Biol., 2026

2025

Mamba time series forecasting with uncertainty propagation.

Pedro Pessoa, Paul Campitelli, Douglas Shepherd, S. Banu Ozkan, Steve Pressé

CoRR, March, 2025

Mamba time series forecasting with uncertainty quantification.

Pedro Pessoa, Paul Campitelli, Douglas Shepherd, S. Banu Ozkan, Steve Pressé

Mach. Learn. Sci. Technol., 2025

2022

Dynamic coupling of residues within proteins as a mechanistic foundation of many enigmatic pathogenic missense variants.

Nicholas J. Ose, Brandon M. Butler, Avishek Kumar, I. Can Kazan, Maxwell D. Sanderford, Sudhir Kumar, S. Banu Ozkan

PLoS Comput. Biol., 2022

2020

Allostery and Epistasis: Emergent Properties of Anisotropic Networks.

Paul Campitelli, S. Banu Ozkan

Entropy, 2020

2018

Coevolving residues inform protein dynamics profiles and disease susceptibility of nSNVs.

Brandon M. Butler, I. Can Kazan, Avishek Kumar, S. Banu Ozkan

PLoS Comput. Biol., 2018

2016

Adaptive BP-Dock: An Induced Fit Docking Approach for Full Receptor Flexibility.

Ashini Bolia, S. Banu Ozkan

J. Chem. Inf. Model., 2016

2014

BP-Dock: A Flexible Docking Scheme for Exploring Protein-Ligand Interactions Based on Unbound Structures.

Ashini Bolia, Z. Nevin Gerek, S. Banu Ozkan

J. Chem. Inf. Model., 2014

2012

Collective Dynamics Differentiates Functional Divergence in Protein Evolution.

Tyler J. Glembo, Daniel W. Farrell, Z. Nevin Gerek, M. F. Thorpe, S. Banu Ozkan

PLoS Comput. Biol., 2012

2011

Change in Allosteric Network Affects Binding Affinities of PDZ Domains: Analysis through Perturbation Response Scanning.

Z. Nevin Gerek, S. Banu Ozkan

PLoS Comput. Biol., 2011

2004

Conformational search of peptides and proteins: Monte Carlo minimization with an adaptive bias method applied to the heptapeptide deltorphin.

S. Banu Ozkan, Hagai Meirovitch

J. Comput. Chem., 2004