Saugat Poudel

According to our database, Saugat Poudel authored at least 5 papers between 2018 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2021

Independent component analysis recovers consistent regulatory signals from disparate datasets.

Anand V. Sastry, Alyssa Hu, David Heckmann, Saugat Poudel, Erol S. Kavvas, Bernhard O. Palsson

PLoS Comput. Biol., 2021

iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning.

Kevin Rychel, Katherine Decker, Anand V. Sastry, Patrick V. Phaneuf, Saugat Poudel, Bernhard O. Palsson

Nucleic Acids Res., 2021

Optimal dimensionality selection for independent component analysis of transcriptomic data.

John Luke McConn, Cameron R. Lamoureux, Saugat Poudel, Bernhard O. Palsson, Anand V. Sastry

BMC Bioinform., 2021

2019

A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.

Yara Seif, Jonathan M. Monk, Nathan Mih, Hannah Tsunemoto, Saugat Poudel, Cristal Zuñiga, Jared Broddrick, Karsten Zengler, Bernhard O. Palsson

PLoS Comput. Biol., 2019

2018

Updated and standardized genome-scale reconstruction of Mycobacterium tuberculosis H37Rv, iEK1011, simulates flux states indicative of physiological conditions.

Erol S. Kavvas, Yara Seif, James T. Yurkovich, Charles J. Norsigian, Saugat Poudel, William W. Greenwald, Sankha Ghatak, Bernhard O. Palsson, Jonathan M. Monk

BMC Syst. Biol., 2018