Saurabh Sinha

Orcid: 0000-0001-6033-7746

Affiliations:
  • University of Illinois at Urbana-Champaign, IL, USA


According to our database1, Saurabh Sinha authored at least 22 papers between 2007 and 2020.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2020
Tissue-guided LASSO for prediction of clinical drug response using preclinical samples.
PLoS Comput. Biol., 2020

Uncovering Effective Explanations for Interactive Genomic Data Analysis.
Patterns, 2020

2019
Identification of pathways associated with chemosensitivity through network embedding.
PLoS Comput. Biol., 2019

2018
An information theoretic treatment of sequence-to-expression modeling.
PLoS Comput. Biol., 2018

SigMat: a classification scheme for gene signature matching.
Bioinform., 2018

Entity Set Search of Scientific Literature: An Unsupervised Ranking Approach.
Proceedings of the 41st International ACM SIGIR Conference on Research & Development in Information Retrieval, 2018

2017
A novel method for predicting activity of cis-regulatory modules, based on a diverse training set.
Bioinform., 2017

Life-iNet: A Structured Network-Based Knowledge Exploration and Analytics System for Life Sciences.
Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017

2016
Automated prostate tissue referencing for cancer detection and diagnosis.
BMC Bioinform., 2016

Characterizing gene sets using discriminative random walks with restart on heterogeneous biological networks.
Bioinform., 2016

2015
KnowEnG: a knowledge engine for genomics.
J. Am. Medical Informatics Assoc., 2015

2014
Quantitative Modeling of a Gene's Expression from Its Intergenic Sequence.
PLoS Comput. Biol., 2014

Motif Enrichment Tool.
Nucleic Acids Res., 2014

2011
A new segmentation framework for infrared spectroscopic imaging using frequent pattern mining.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances.
PLoS Comput. Biol., 2010

Thermodynamics-Based Models of Transcriptional Regulation by Enhancers: The Roles of Synergistic Activation, Cooperative Binding and Short-Range Repression.
PLoS Comput. Biol., 2010

Towards realistic benchmarks for multiple alignments of non-coding sequences.
BMC Bioinform., 2010

2009
Alignment and Prediction of <i>cis</i>-Regulatory Modules Based on a Probabilistic Model of Evolution.
PLoS Comput. Biol., 2009

2008
Heart of the Matter: Discovering the Consensus of Multiple Clustering Results.
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

2007
MORPH: Probabilistic Alignment Combined with Hidden Markov Models of <i>cis</i>-Regulatory Modules.
PLoS Comput. Biol., 2007

Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment.
Bioinform., 2007

A statistical method for alignment-free comparison of regulatory sequences.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007


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