Shawn Cokus

According to our database, Shawn Cokus authored at least 7 papers between 2000 and 2011.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of two.

2011

Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data.

David López, David Casero, Shawn Cokus, Sabeeha S. Merchant, Matteo Pellegrini

BMC Bioinform., 2011

2010

BS Seeker: precise mapping for bisulfite sequencing.

Pao-Yang Chen, Shawn Cokus, Matteo Pellegrini

BMC Bioinform., 2010

2009

Detecting coordinated regulation of multi-protein complexes using logic analysis of gene expression.

Einat Sprinzak, Shawn Cokus, Todd O. Yeates, David S. Eisenberg, Matteo Pellegrini

BMC Syst. Biol., 2009

2007

An improved method for identifying functionally linked proteins using phylogenetic profiles.

Shawn Cokus, Sayaka Mizutani, Matteo Pellegrini

BMC Bioinform., 2007

2006

Modelling the network of cell cycle transcription factors in the yeast <i>Saccharomyces cerevisiae</i>.

Shawn Cokus, Sherri Rose, David R. Haynor, Niels Grønbech-Jensen, Matteo Pellegrini

BMC Bioinform., 2006

2003

Inferring protein interactions from phylogenetic distance matrices.

Jason Gertz, Georgiy Elfond, Anna Shustrova, Matt Weisinger, Matteo Pellegrini, Shawn Cokus, Bruce Rothschild

Bioinform., 2003

2000

Decomposition Theorems for Conditional Sign-Solvability and Sign-Solvability of General Systems.

Shawn Cokus, Victor Klee

SIAM J. Matrix Anal. Appl., 2000