Shide Liang

According to our database, Shide Liang authored at least 9 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2023

Ab Initio Prediction of 3-D Conformations for Protein Long Loops with High Accuracy and Applications to Antibody CDRH3 Modeling.

Shide Liang, Chi Zhang, Mingfu Zhu

J. Chem. Inf. Model., December, 2023

2021

De novo protein design by an energy function based on series expansion in distance and orientation dependence.

Shide Liang, Zhixiu Li, Jian Zhan, Yaoqi Zhou

Bioinform., 2021

2014

LEAP: Highly accurate prediction of protein loop conformations by integrating coarse-grained sampling and optimized energy scores with all-atom refinement of backbone and side chains.

Shide Liang, Chi Zhang, Yaoqi Zhou

J. Comput. Chem., 2014

Kotai Antibody Builder: automated high-resolution structural modeling of antibodies.

Kazuo Yamashita, Kazuyoshi Ikeda, Karlou Mar Amada, Shide Liang, Yuko Tsuchiya, Haruki Nakamura, Hiroki Shirai, Daron M. Standley

Bioinform., 2014

2013

A novel function prediction approach using protein overlap networks.

Shide Liang, Dandan Zheng, Daron M. Standley, Huarong Guo, Chi Zhang

BMC Syst. Biol., 2013

2011

Protein side chain modeling with orientation-dependent atomic force fields derived by series expansions.

Shide Liang, Yaoqi Zhou, Nick V. Grishin, Daron M. Standley

J. Comput. Chem., 2011

Fast and accurate prediction of protein side-chain conformations.

Shide Liang, Dandan Zheng, Chi Zhang, Daron M. Standley

Bioinform., 2011

2010

EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results.

Shide Liang, Dandan Zheng, Daron M. Standley, Bo Yao, Martin Zacharias, Chi Zhang

BMC Bioinform., 2010

2009

Prediction of antigenic epitopes on protein surfaces by consensus scoring.

Shide Liang, Dandan Zheng, Chi Zhang, Martin Zacharias

BMC Bioinform., 2009