Nick V. Grishin
Orcid: 0000-0003-4108-1153
According to our database1,
Nick V. Grishin
authored at least 50 papers
between 2001 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2024
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2.
PLoS Comput. Biol., February, 2024
2022
2020
Mutation severity spectrum of rare alleles in the human genome is predictive of disease type.
PLoS Comput. Biol., 2020
pCRM1exportome: database of predicted CRM1-dependent Nuclear Export Signal (NES) motifs in cancer-related genes.
Bioinform., 2020
The Potential of Single Cell RNA-Sequencing Data for the Prediction of Gastric Cancer Serum Biomarkers.
Proceedings of the Mathematical and Computational Oncology, 2020
2019
Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways.
PLoS Comput. Biol., 2019
2018
2017
Nucleic Acids Res., 2017
2016
Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer.
PLoS Comput. Biol., 2016
2015
BMC Bioinform., 2015
Bioinform., 2015
2014
2013
Bioinform., 2013
M2SG: mapping human disease-related genetic variants to protein sequences and genomic loci.
Bioinform., 2013
Bioinform., 2013
2012
2011
Protein side chain modeling with orientation-dependent atomic force fields derived by series expansions.
J. Comput. Chem., 2011
Bioinform., 2011
2010
Bioinform., 2010
Proceedings of the 10th IEEE International Conference on Bioinformatics and Bioengineering, 2010
2009
ProSMoS server: a pattern-based search using interaction matrix representation of protein structures.
Nucleic Acids Res., 2009
COMPASS server for homology detection: improved statistical accuracy, speed and functionality.
Nucleic Acids Res., 2009
HorA web server to infer homology between proteins using sequence and structural similarity.
Nucleic Acids Res., 2009
Considering scores between unrelated proteins in the search database improves profile comparison.
BMC Bioinform., 2009
Bioinform., 2009
Phenotypic categorization of genetic skin diseases reveals new relations between phenotypes, genes and pathways.
Bioinform., 2009
Database J. Biol. Databases Curation, 2009
2008
PROMALS3D web server for accurate multiple protein sequence and structure alignments.
Nucleic Acids Res., 2008
Nucleic Acids Res., 2008
Statistics of Random Protein Superpositions: <i>p</i>-Values for Pairwise Structure Alignment.
J. Comput. Biol., 2008
2007
Nucleic Acids Res., 2007
BMC Bioinform., 2007
Searching for three-dimensional secondary structural patterns in proteins with ProSMoS.
Bioinform., 2007
PROMALS: towards accurate multiple sequence alignments of distantly related proteins.
Bioinform., 2007
2006
Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
Bioinform., 2006
The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria.
Bioinform., 2006
2005
PALSSE: A program to delineate linear secondary structural elements from protein structures.
BMC Bioinform., 2005
2004
Estimates of statistical significance for comparison of individual positions in multiple sequence alignments.
BMC Bioinform., 2004
BMC Bioinform., 2004
Quality of alignment comparison by COMPASS improves with inclusion of diverse confident homologs.
Bioinform., 2004
2003
Bioinform., 2003
Probabilistic scoring measures for profile-profile comparison yield more accurate short seed alignments.
Bioinform., 2003
2002
2001
Bioinform., 2001