Shiyong Lu

According to our database, Shiyong Lu authored at least 136 papers between 1999 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Infrastructure-level Support for GPU-Enabled Deep Learning in DATAVIEW.

Junwen Liu, Ziyun Xiao, Shiyong Lu, Dunren Che, Ming Dong, Changxin Bai

Future Gener. Comput. Syst., April, 2023

A Generic Efficient Scientific Workflow Engine for the Optimizations of Run-Time Execution.

Changxin Bai, Junwen Liu, Anik Tahabilder, M. M. Imran, Shiyong Lu, Dunren Che

Proceedings of the IEEE International Conference on Software Services Engineering, 2023

2022

A Security Framework for Scientific Workflow Provenance Access Control Policies.

Fahima Amin Bhuyan, Shiyong Lu, Robert G. Reynolds, Jia Zhang, Ishtiaq Ahmed

IEEE Trans. Serv. Comput., 2022

Securing Big Data Scientific Workflows via Trusted Heterogeneous Environments.

Saeid Mofrad, Ishtiaq Ahmed, Fengwei Zhang, Shiyong Lu, Ping Yang, Heming Cui

IEEE Trans. Dependable Secur. Comput., 2022

2021

Deep-Learning-as-a-Workflow (DLaaW): An Innovative Approach to Enabling Deep Learning in Scientific Workflows.

Junwen Liu, Ziyun Xiao, Shiyong Lu, Dunren Che

Proceedings of the 2021 IEEE International Conference on Big Data (Big Data), 2021

2020

A Survey of Modern Scientific Workflow Scheduling Algorithms and Systems in the Era of Big Data.

Junwen Liu, Shiyong Lu, Dunren Che

Proceedings of the 2020 IEEE International Conference on Services Computing, 2020

SEED: Confidential Big Data Workflow Scheduling with Intel SGX Under Deadline Constraints.

Ishtiaq Ahmed, Saeid Mofrad, Shiyong Lu, Changxin Bai, Fengwei Zhang, Dunren Che

Proceedings of the 2020 IEEE International Conference on Services Computing, 2020

2019

SciBlock: A Blockchain-Based Tamper-Proof Non-Repudiable Storage for Scientific Workflow Provenance.

Dinuni K. Fernando, Siddharth Kulshrestha, Jerome Dinal Herath, Nitin Mahadik, Yanzhe Ma, Changxin Bai, Ping Yang, Guanhua Yan, Shiyong Lu

Proceedings of the 5th IEEE International Conference on Collaboration and Internet Computing, 2019

iCATS: Scheduling Big Data Workflows in the Cloud Using Cultural Algorithms.

Seyed Ziae Mousavi Mojab, Mahdi Ebrahimi, Robert G. Reynolds, Shiyong Lu

Proceedings of the IEEE Fifth International Conference on Big Data Computing Service and Applications, 2019

RAMP: Real-Time Anomaly Detection in Scientific Workflows.

Jerome Dinal Herath, Changxin Bai, Guanhua Yan, Ping Yang, Shiyong Lu

Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

LPOD: A Local Path Based Optimized Scheduling Algorithm for Deadline-Constrained Big Data Workflows in the Cloud.

Changxin Bai, Shiyong Lu, Ishtiaq Ahmed, Dunren Che, Aravind Mohan

Proceedings of the 2019 IEEE International Congress on Big Data, 2019

SecDATAVIEW: a secure big data workflow management system for heterogeneous computing environments.

Saeid Mofrad, Ishtiaq Ahmed, Shiyong Lu, Ping Yang, Heming Cui, Fengwei Zhang

Proceedings of the 35th Annual Computer Security Applications Conference, 2019

Multi-Objective Resource Mapping and Allocation for Volunteer Cloud Computing.

Tessema Mengistu, Dunren Che, Shiyong Lu

Proceedings of the 12th IEEE International Conference on Cloud Computing, 2019

2018

A comparison study of intel SGX and AMD memory encryption technology.

Saeid Mofrad, Fengwei Zhang, Shiyong Lu, Weidong Shi

Proceedings of the 7th International Workshop on Hardware and Architectural Support for Security and Privacy, 2018

Scheduling Big Data Workflows in the Cloud under Deadline Constraints.

Mahdi Ebrahimi, Aravind Mohan, Shiyong Lu

Proceedings of the Fourth IEEE International Conference on Big Data Computing Service and Applications, 2018

Diagnosis Recommendation Using Machine Learning Scientific Workflows.

Ishtiaq Ahmed, Shiyong Lu, Changxin Bai, Fahima Amin Bhuyan

Proceedings of the 2018 IEEE International Congress on Big Data, 2018

Quality Analysis for Scientific Workflow Provenance Access Control Policies.

Fahima Amin Bhuyan, Shiyong Lu, Robert G. Reynolds, Ishtiaq Ahmed, Jia Zhang

Proceedings of the 2018 IEEE International Conference on Services Computing, 2018

Semi-Markov Process Based Reliability and Availability Prediction for Volunteer Cloud Systems.

Tessema M. Mengistu, Dunren Che, Abdulrahman Alahmadi, Shiyong Lu

Proceedings of the 11th IEEE International Conference on Cloud Computing, 2018

2017

Predicting efficacy of therapeutic services for autism spectrum disorder using scientific workflows.

Fahima Amin Bhuyan, Shiyong Lu, Ishtiaq Ahmed, Jia Zhang

Proceedings of the 2017 IEEE International Conference on Big Data (IEEE BigData 2017), 2017

Scalable Provenance Storage and Querying Using Pig Latin for Big Data Workflows.

Fahima Amin Bhuyan, Shiyong Lu, Dong Ruan, Jia Zhang

Proceedings of the 2017 IEEE International Conference on Services Computing, 2017

2016

Feedback or Research: Separating Pre-purchase from Post-purchase Consumer Reviews.

Mehedi Hasan, Alexander Kotov, Aravind Mohan, Shiyong Lu, Paul M. Stieg

Proceedings of the Advances in Information Retrieval, 2016

Collaborative Scientific Workflow Composition as a Service: An Infrastructure Supporting Collaborative Data Analytics Workflow Design and Management.

Jia Zhang, Qihao Bao, Xiaoyi Duan, Shiyong Lu, Lijun Xue, Runyu Shi, Pingbo Tang

Proceedings of the 2nd IEEE International Conference on Collaboration and Internet Computing, 2016

Scheduling big data workflows in the cloud under budget constraints.

Aravind Mohan, Mahdi Ebrahimi, Shiyong Lu, Alexander Kotov

Proceedings of the 2016 IEEE International Conference on Big Data (IEEE BigData 2016), 2016

A NoSQL Data Model for Scalable Big Data Workflow Execution.

Aravind Mohan, Mahdi Ebrahimi, Shiyong Lu, Alexander Kotov

Proceedings of the 2016 IEEE International Congress on Big Data, San Francisco, CA, USA, June 27, 2016

2015

A Service Framework for Scientific Workflow Management in the Cloud.

Yong Zhao, Youfu Li, Ioan Raicu, Shiyong Lu, Cui Lin, Yanzhe Zhang, Wenhong Tian, Ruini Xue

IEEE Trans. Serv. Comput., 2015

Typetheoretic Approach to the Shimming Problem in Scientific Workflows.

Andrey Kashlev, Shiyong Lu, Artem Chebotko

IEEE Trans. Serv. Comput., 2015

Enabling scalable scientific workflow management in the Cloud.

Yong Zhao, Youfu Li, Ioan Raicu, Shiyong Lu, Wenhong Tian, Heng Liu

Future Gener. Comput. Syst., 2015

Parametric and Non-parametric User-aware Sentiment Topic Models.

Zaihan Yang, Alexander Kotov, Aravind Mohan, Shiyong Lu

Proceedings of the 38th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2015

BDAP: A Big Data Placement Strategy for Cloud-Based Scientific Workflows.

Mahdi Ebrahimi, Aravind Mohan, Andrey Kashlev, Shiyong Lu

Proceedings of the First IEEE International Conference on Big Data Computing Service and Applications, 2015

TPS: A task placement strategy for big data workflows.

Mahdi Ebrahimi, Aravind Mohan, Shiyong Lu, Robert G. Reynolds

Proceedings of the 2015 IEEE International Conference on Big Data (IEEE BigData 2015), Santa Clara, CA, USA, October 29, 2015

A Big Data Modeling Methodology for Apache Cassandra.

Artem Chebotko, Andrey Kashlev, Shiyong Lu

Proceedings of the 2015 IEEE International Congress on Big Data, New York City, NY, USA, June 27, 2015

Towards an Online Service for Learning Computational Thinking Using Scientific Workflows.

Aravind Mohan, Shiyong Lu, Ke Zhang

Proceedings of the 2015 IEEE International Conference on Services Computing, 2015

A Folksonomy-Based Social Recommendation System for Scientific Workflow Reuse.

Aravind Mohan, Mahdi Ebrahimi, Shiyong Lu

Proceedings of the 2015 IEEE International Conference on Services Computing, 2015

2014

Confucius: A Tool Supporting Collaborative Scientific Workflow Composition.

Jia Zhang, Daniel Kuc, Shiyong Lu

IEEE Trans. Serv. Comput., 2014

Satisfiability Analysis of Workflows with Control-Flow Patterns and Authorization Constraints.

Ping Yang, Xing Xie, Indrakshi Ray, Shiyong Lu

IEEE Trans. Serv. Comput., 2014

Devising a Cloud Scientific Workflow Platform for Big Data.

Yong Zhao, Youfu Li, Shiyong Lu, Ioan Raicu, Cui Lin

Proceedings of the 2014 IEEE World Congress on Services, 2014

Adapting Medical Image Processing Tasks to a Scalable Scientific Workflow System.

Hajar Hamidian, Shiyong Lu, Satyendra P. Rana, Farshad Fotouhi, Hamid Soltanian-Zadeh

Proceedings of the 2014 IEEE World Congress on Services, 2014

Addressing the Shimming Problem in Big Data Scientific Workflows.

Aravind Mohan, Shiyong Lu, Alexander Kotov

Proceedings of the IEEE International Conference on Services Computing, SCC 2014, Anchorage, AK, USA, June 27, 2014

A System Architecture for Running Big Data Workflows in the Cloud.

Andrey Kashlev, Shiyong Lu

Proceedings of the IEEE International Conference on Services Computing, SCC 2014, Anchorage, AK, USA, June 27, 2014

Architecting Cloud Workflow: Theory and Practice.

Yong Zhao, Youfu Li, Ioan Raicu, Shiyong Lu, Xuan Zhang

Proceedings of the 14th IEEE International Conference on Computer and Information Technology, 2014

2013

Trustworthy and Dynamic Mobile Task Scheduling in Data-Intensive Scientific Workflow Environments.

Zijiang Yang, Shiyong Lu, Ping Yang, Andrey Kashlev

Int. J. Comput. Their Appl., 2013

OPQL: Querying scientific workflow provenance at the graph level.

Chunhyeok Lim, Shiyong Lu, Artem Chebotko, Farshad Fotouhi, Andrey Kashlev

Data Knowl. Eng., 2013

Storing, Indexing and Querying Large Provenance Data Sets as RDF Graphs in Apache HBase.

Artem Chebotko, John Abraham, Pearl Brazier, Anthony Piazza, Andrey Kashlev, Shiyong Lu

Proceedings of the IEEE Ninth World Congress on Services, 2013

Coercion Approach to the Shimming Problem in Scientific Workflows.

Andrey Kashlev, Shiyong Lu, Artem Chebotko

Proceedings of the 2013 IEEE International Conference on Services Computing, Santa Clara, CA, USA, June 28, 2013

2012

A Dataflow-Based Scientific Workflow Composition Framework.

Xubo Fei, Shiyong Lu

IEEE Trans. Serv. Comput., 2012

Secure XML querying based on authorization graphs.

Artem Chebotko, Seunghan Chang, Shiyong Lu, Farshad Fotouhi

Inf. Syst. Frontiers, 2012

CloudFlow Introduction.

Yong Zhao, Cui Lin, Shiyong Lu

Proceedings of the 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, 2012

A User-Defined Exception Handling Framework in the VIEW Scientific Workflow Management System.

Dong Ruan, Shiyong Lu, Aravind Mohan, Xubo Fei, Jia Zhang

Proceedings of the 2012 IEEE Ninth International Conference on Services Computing, 2012

Service-Oriented Architecture for SPDFLOW: A Healthcare Workflow System for Sterile Processing Departments.

Xiaoyu Ma, Shiyong Lu, Kai Yang

Proceedings of the 2012 IEEE Ninth International Conference on Services Computing, 2012

Analysis of Scientific Workflow Provenance Access Control Policies.

Ruiqi Luo, Ping Yang, Shiyong Lu, Mikhail I. Gofman

Proceedings of the 2012 IEEE Ninth International Conference on Services Computing, 2012

2011

Data Replication in Data Intensive Scientific Applications with Performance Guarantee.

Dharma Teja Nukarapu, Bin Tang, Liqiang Wang, Shiyong Lu

IEEE Trans. Parallel Distributed Syst., 2011

Model Checking Approach to Secure Host Access Enforcement of Mobile Tasks in Scientific Workflows.

Zijiang Yang, Shiyong Lu, Ping Yang, Fahima Amin Bhuyan

Int. J. Comput. Their Appl., 2011

Collaborative scientific workflows supporting collaborative science.

Shiyong Lu, Jia Zhang

Int. J. Bus. Process. Integr. Manag., 2011

Storing, reasoning, and querying OPM-compliant scientific workflow provenance using relational databases.

Chunhyeok Lim, Shiyong Lu, Artem Chebotko, Farshad Fotouhi

Future Gener. Comput. Syst., 2011

SCPOR: An elastic workflow scheduling algorithm for services computing.

Cui Lin, Shiyong Lu

Proceedings of the 2011 IEEE International Conference on Service-Oriented Computing and Applications, 2011

Opportunities and Challenges in Running Scientific Workflows on the Cloud.

Yong Zhao, Xubo Fei, Ioan Raicu, Shiyong Lu

Proceedings of the 2011 International Conference on Cyber-Enabled Distributed Computing and Knowledge Discovery, 2011

OPQL: A First OPM-Level Query Language for Scientific Workflow Provenance.

Chunhyeok Lim, Shiyong Lu, Artem Chebotko, Farshad Fotouhi

Proceedings of the IEEE International Conference on Services Computing, 2011

A Granular Concurrency Control for Collaborative Scientific Workflow Composition.

Xubo Fei, Shiyong Lu, Jia Zhang

Proceedings of the IEEE International Conference on Services Computing, 2011

Scheduling Scientific Workflows Elastically for Cloud Computing.

Cui Lin, Shiyong Lu

Proceedings of the IEEE International Conference on Cloud Computing, 2011

2010

Secure Abstraction Views for Scientific Workflow Provenance Querying.

Artem Chebotko, Shiyong Lu, Seunghan Chang, Farshad Fotouhi, Ping Yang

IEEE Trans. Serv. Comput., 2010

Coclustering for cross-subject fiber tract analysis through diffusion tensor imaging.

Cui Lin, Darshan Pai, Shiyong Lu, Otto Muzik, Jing Hua

IEEE Trans. Inf. Technol. Biomed., 2010

Information flow analysis of scientific workflows.

Ping Yang, Shiyong Lu, Mikhail I. Gofman, Zijiang Yang

J. Comput. Syst. Sci., 2010

RDFProv: A relational RDF store for querying and managing scientific workflow provenance.

Artem Chebotko, Shiyong Lu, Xubo Fei, Farshad Fotouhi

Data Knowl. Eng., 2010

Mapping XML Data to Relational Data: A DOM-Based Approach

Mustafa Atay, Yezhou Sun, Dapeng Liu, Shiyong Lu, Farshad Fotouhi

CoRR, 2010

Confucius: A Scientific Collaboration System Using Collaborative Scientific Workflows.

Jia Zhang, Daniel Kuc, Shiyong Lu

Proceedings of the IEEE International Conference on Web Services, 2010

A Collectional Data Model for Scientific Workflow Composition.

Xubo Fei, Shiyong Lu

Proceedings of the IEEE International Conference on Web Services, 2010

Task Exception Handling in the VIEW Scientific Workflow System.

Dong Ruan, Shiyong Lu

Proceedings of the 2010 IEEE International Conference on Services Computing, 2010

Prospective and Retrospective Provenance Collection in Scientific Workflow Environments.

Chunhyeok Lim, Shiyong Lu, Artem Chebotko, Farshad Fotouhi

Proceedings of the 2010 IEEE International Conference on Services Computing, 2010

2009

A Reference Architecture for Scientific Workflow Management Systems and the VIEW SOA Solution.

Cui Lin, Shiyong Lu, Xubo Fei, Artem Chebotko, Darshan Pai, Zhaoqiang Lai, Farshad Fotouhi, Jing Hua

IEEE Trans. Serv. Comput., 2009

Association analysis between Intragenomic Gene Conversions and pathogenicity in genomes of Escherichia coli and Shigella spp.: a scientific workflow approach.

Jamal Alhiyafi, Cavitha Sabesan, Shiyong Lu, Jeffrey L. Ram

Int. J. Funct. Informatics Pers. Medicine, 2009

Simulation of genomic recombination and the influence of DNA sequence diversity on cluster formation and detectability of recombination: a scientific workflow method.

Jamal Alhiyafi, Shiyong Lu, Jeffrey L. Ram

Int. J. Comput. Biol. Drug Des., 2009

RECOMBFLOW: a scientific workflow environment for Intragenomic Gene Conversion analysis in bacterial genomes, including the pathogen Streptococcus pyogenes.

Jamal Alhiyafi, Cavitha Sabesan, Shiyong Lu, Jeffrey L. Ram

Int. J. Bioinform. Res. Appl., 2009

Atomicity and provenance support for pipelined scientific workflows.

Liqiang Wang, Shiyong Lu, Xubo Fei, Artem Chebotko, H. Victoria Bryant, Jeffrey L. Ram

Future Gener. Comput. Syst., 2009

Semantics preserving SPARQL-to-SQL translation.

Artem Chebotko, Shiyong Lu, Farshad Fotouhi

Data Knowl. Eng., 2009

Ontology-Based Annotation of Multimedia Language Data for the Semantic Web

Artem Chebotko, Shiyong Lu, Farshad Fotouhi, Anthony Aristar

CoRR, 2009

ImageSpace: An Environment for Image Ontology Management

Shiyong Lu, Rong Huang, Artem Chebotko, Yu Deng, Farshad Fotouhi

CoRR, 2009

Cloud Computing and Grid Computing 360-Degree Compared

Ian T. Foster, Yong Zhao, Ioan Raicu, Shiyong Lu

CoRR, 2009

Collaborative Scientific Workflows.

Shiyong Lu, Jia Zhang

Proceedings of the IEEE International Conference on Web Services, 2009

A MapReduce-Enabled Scientific Workflow Composition Framework.

Xubo Fei, Shiyong Lu, Cui Lin

Proceedings of the IEEE International Conference on Web Services, 2009

A Task Abstraction and Mapping Approach to the Shimming Problem in Scientific Workflows.

Cui Lin, Shiyong Lu, Xubo Fei, Darshan Pai, Jing Hua

Proceedings of the 2009 IEEE International Conference on Services Computing (SCC 2009), 2009

2008

Efficient Processing of RDF Queries with Nested Optional Graph Patterns in an RDBMS.

Artem Chebotko, Shiyong Lu, Mustafa Atay, Farshad Fotouhi

Int. J. Semantic Web Inf. Syst., 2008

Cocluster analysis of thalamo-cortical fibre tracts extracted from diffusion tensor MRI.

Cui Lin, Shiyong Lu, Xuwei Liang, Jing Hua, Otto Muzik

Int. J. Data Min. Bioinform., 2008

Scientific Workflow Provenance Querying with Security Views.

Artem Chebotko, Seunghan Chang, Shiyong Lu, Farshad Fotouhi, Ping Yang

Proceedings of the Ninth International Conference on Web-Age Information Management, 2008

A Logic Programming Approach to Scientific Workflow Provenance Querying.

Yong Zhao, Shiyong Lu

Proceedings of the Provenance and Annotation of Data and Processes, 2008

Service-Oriented Architecture for VIEW: A Visual Scientific Workflow Management System.

Cui Lin, Shiyong Lu, Zhaoqiang Lai, Artem Chebotko, Xubo Fei, Jing Hua, Farshad Fotouhi

Proceedings of the 2008 IEEE International Conference on Services Computing (SCC 2008), 2008

2007

Efficient schema-based XML-to-Relational data mapping.

Mustafa Atay, Artem Chebotko, Dapeng Liu, Shiyong Lu, Farshad Fotouhi

Inf. Syst., 2007

Multimodality Data Integration in Epilepsy.

Otto Muzik, Diane C. Chugani, Guangyu Zou, Jing Hua, Yi Lu, Shiyong Lu, Eishi Asano, Harry T. Chugani

Int. J. Biomed. Imaging, 2007

XML subtree reconstruction from relational storage of XML documents.

Artem Chebotko, Mustafa Atay, Shiyong Lu, Farshad Fotouhi

Data Knowl. Eng., 2007

Relational Nested Optional Join for Efficient Semantic Web Query Processing.

Artem Chebotko, Mustafa Atay, Shiyong Lu, Farshad Fotouhi

Proceedings of the Advances in Data and Web Management, 2007

Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor MRI.

Cui Lin, Shiyong Lu, Danqing Wu, Jing Hua, Otto Muzik

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters.

Xubo Fei, Shiyong Lu, Horia F. Pop, Lily R. Liang

Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

A Dataflow-Oriented Atomicity and Provenance System for Pipelined Scientific Workflows.

Liqiang Wang, Shiyong Lu, Xubo Fei, Jeffrey L. Ram

Proceedings of the Computational Science - ICCS 2007, 7th International Conference, Beijing, China, May 27, 2007

Formal Modeling and Analysis of Scientific Workflows Using Hierarchical State Machines.

Ping Yang, Zijiang Yang, Shiyong Lu

Proceedings of the Third International Conference on e-Science and Grid Computing, 2007

Storing and Querying Scientific Workflow Provenance Metadata Using an RDBMS.

Artem Chebotko, Xubo Fei, Cui Lin, Shiyong Lu, Farshad Fotouhi

Proceedings of the Third International Conference on e-Science and Grid Computing, 2007

XML-to-SQL Query Mapping in the Presence of Multi-valued Schema Mappings and Recursive XML Schemas.

Mustafa Atay, Artem Chebotko, Shiyong Lu, Farshad Fotouhi

Proceedings of the Database and Expert Systems Applications, 18th International Conference, 2007

Itinerary-Based Access Control for Mobile Tasks in Scientific Workflows.

Zijiang Yang, Shiyong Lu, Ping Yang

Proceedings of the 21st International Conference on Advanced Information Networking and Applications (AINA 2007), 2007

Graph Matching Based Authorization Model for Efficient Secure XML Querying.

Seunghan Chang, Artem Chebotko, Shiyong Lu, Farshad Fotouhi

Proceedings of the 21st International Conference on Advanced Information Networking and Applications (AINA 2007), 2007

Computational Methods for Analysis of Cryptic Recombination in the Performance of Genomic Recombination Detection Software.

Jamal Alhiyafi, Cavitha Sabesan, Shiyong Lu, Melphine Harriott, Deborah Jurczyszyn, Raquel P. Ritchie, Felicitas S. Gonzales, Jeffrey L. Ram

Proceedings of the 21st International Conference on Advanced Information Networking and Applications (AINA 2007), 2007

VIEW: a Visual Scientific Workflow Management System.

Artem Chebotko, Cui Lin, Xubo Fei, Zhaoqiang Lai, Shiyong Lu, Jing Hua, Farshad Fotouhi

Proceedings of the 2007 IEEE International Conference on Services Computing, 2007

2006

Automatic workflow verification and generation.

Shiyong Lu, Arthur J. Bernstein, Philip M. Lewis

Theor. Comput. Sci., 2006

Pama: a Fast String Matching Algorithm.

Shiyong Lu, Feng Cao, Yi Lu

Int. J. Found. Comput. Sci., 2006

Completeness and realizability: conditions for automatic generation of workflows.

Shiyong Lu, Arthur J. Bernstein, Philip M. Lewis

Int. J. Found. Comput. Sci., 2006

FM-test: a fuzzy-set-theory-based approach to differential gene expression data analysis.

Lily R. Liang, Shiyong Lu, Xuena Wang, Yi Lu, Vinay Mandal, Dorrelyn Patacsil, Deepak Kumar

BMC Bioinform., 2006

FM-test: A Fuzzy Set Theory Based Approach for Discovering Diabetes Genes.

Yi Lu, Shiyong Lu, Lily R. Liang, Deepak Kumar

Proceedings of the Interdisciplinary and Multidisciplinary Research in Computer Science, 2006

Mining Correlation between Motifs and Gene Expression.

Yi Lu, Shiyong Lu, Adrian E. Platts, Stephen A. Krawetz

Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 2006

GCA: A Coclustering Algorithm for Thalamo-Cortico-Thalamic Connectivity Analysis.

Cui Lin, Shiyong Lu, Xuwei Liang, Jing Hua

Proceedings of the Workshops Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 2006

CM-test: An Innovative Divergence Measurement and Its Application in Diabetes Gene Expression Data Analysis.

Lily R. Liang, Shiyong Lu, Yi Lu, Puneet Dhawan, Deepak Kumar

Proceedings of the 2006 IEEE International Conference on Granular Computing, 2006

Runtime Security Verification for Itinerary-Driven Mobile Agents.

Zijiang Yang, Shiyong Lu, Ping Yang

Proceedings of the Second International Symposium on Dependable Autonomic and Secure Computing (DASC 2006), 29 September, 2006

Fast search in DNA sequence databases using punctuation and indexing.

Yi Lu, Shiyong Lu, Jeffrey L. Ram

Proceedings of the IASTED International Conference on Advances in Computer Science and Technology, 2006

PDC: Pattern discovery with confidence in DNA sequences.

Yi Lu, Shiyong Lu, Farshad Fotouhi, Yan Sun, Zijiang Yang, Lily R. Liang

Proceedings of the IASTED International Conference on Advances in Computer Science and Technology, 2006

2005

LINGOES: A Linguistic Ontology Management System.

Farhad Mostowfi, Farshad Fotouhi, Shiyong Lu, Anthony Aristar

J. Digit. Inf. Manag., 2005

An Ontology-Based Multimedia Annotator for the Semantic Web of Language Engineering.

Artem Chebotko, Yu Deng, Shiyong Lu, Farshad Fotouhi, Anthony Aristar

Int. J. Semantic Web Inf. Syst., 2005

On the consistency of XML DTDs.

Shiyong Lu, Yezhou Sun, Mustafa Atay, Farshad Fotouhi

Data Knowl. Eng., 2005

Reconstructing XML Subtrees from Relational Storage of XML documents.

Artem Chebotko, Dapeng Liu, Mustafa Atay, Shiyong Lu, Farshad Fotouhi

Proceedings of the 21st International Conference on Data Engineering Workshops, 2005

A Formal Framework for Agent Itinerary Specification, Security Reasoning and Logic Analysis.

Shiyong Lu, Cheng-Zhong Xu

Proceedings of the 25th International Conference on Distributed Computing Systems Workshops (ICDCS 2005 Workshops), 2005

MetaFinder: A Meta-Search Engine with an Open Architecture.

Chunxia Zhang, Shiyong Lu, Lily R. Liang

Proceedings of the 20th International Conference on Computers and Their Applications, 2005

2004

Correct Execution of Transactions at Different Isolation Levels.

Shiyong Lu, Arthur J. Bernstein, Philip M. Lewis

IEEE Trans. Knowl. Data Eng., 2004

Language engineering for the Semantic Web: a digital library for endangered languages.

Shiyong Lu, Dapeng Liu, Farshad Fotouhi, Ming Dong, Robert G. Reynolds, Anthony Aristar, Martha Ratliff, Geoff Nathan, Joseph Tan, Ronald Powell

Inf. Res., 2004

Incremental genetic K-means algorithm and its application in gene expression data analysis.

Yi Lu, Shiyong Lu, Farshad Fotouhi, Youping Deng, Susan J. Brown

BMC Bioinform., 2004

FGKA: a Fast Genetic K-means Clustering Algorithm.

Yi Lu, Shiyong Lu, Farshad Fotouhi, Youping Deng, Susan J. Brown

Proceedings of the 2004 ACM Symposium on Applied Computing (SAC), 2004

OntoELAN: an ontology-based linguistic multimedia annotator.

Artem Chebotko, Yu Deng, Shiyong Lu, Farshad Fotouhi, Anthony Aristar, Hennie Brugman, Alexander Klassmann, Han Sloetjes, Albert Russel, Peter Wittenburg

Proceedings of the Sixth IEEE International Symposium on Multimedia Software Engineering, 2004

Semantics Based Verification and Synthesis of BPEL4WS Abstract Processes.

Ziyang Duan, Arthur J. Bernstein, Philip M. Lewis, Shiyong Lu

Proceedings of the IEEE International Conference on Web Services (ICWS'04), 2004

A model for abstract process specification, verification and composition.

Ziyang Duan, Arthur J. Bernstein, Philip M. Lewis, Shiyong Lu

Proceedings of the Service-Oriented Computing, 2004

Querying XML Documents from a Relational Database in the Presence of DTDs.

Manjeet Rege, Izabell Caraconcea, Shiyong Lu, Farshad Fotouhi

Proceedings of the Distributed Computing and Internet Technology, 2004

Compressed Pattern Matching in DNA Sequences.

Lei Chen, Shiyong Lu, Jeffrey L. Ram

Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

Annotating Linguistic Data with ImageSpace for the Preservation of Endangered Languages.

Shiyong Lu, Rong Huang, Farshad Fotouhi

Proceedings of the 19th International Conference on Computers and Their Applications, 2004

ImageSpace: an Image Ontology Creation and Annotation Tool for the Semantic Web.

Rong Huang, Shiyong Lu, Farshad Fotouhi

Proceedings of the 19th International Conference on Computers and Their Applications, 2004

2003

Conceptual Data Models for Engineering Information Modeling and Formal Transformation of EER and EXPRESS-G.

Z. M. Ma, Shiyong Lu, Farshad Fotouhi

Proceedings of the Conceptual Modeling, 2003

A New Inlining Algorithm for Mapping XML DTDs to Relational Schemas.

Shiyong Lu, Yezhou Sun, Mustafa Atay, Farshad Fotouhi

Proceedings of the Conceptual Modeling for Novel Application Domains, 2003

A Sufficient and Necessary Condition for the Consistency of XML DTDs.

Shiyong Lu, Yezhou Sun, Mustafa Atay, Farshad Fotouhi

Proceedings of the Conceptual Modeling for Novel Application Domains, 2003

Evolution based approaches to the preservation of endangered natural languages.

Jeffrey M. Stefan, Robert G. Reynolds, F. Fatouhi, Anthony Aristar, Shiyong Lu, Ming Dong

Proceedings of the IEEE Congress on Evolutionary Computation, 2003

ERDraw: An XML-based ER-diagram Drawing and Translation Tool.

Shuyun Xu, Yu Li, Shiyong Lu

Proceedings of the ISCA 18th International Conference Computers and Their Applications, 2003

2002

The Semantic Web: opportunities and challenges for next-generation Web applications.

Shiyong Lu, Ming Dong, Farshad Fotouhi

Inf. Res., 2002

A Structured Approach to Trade Negotiation Applications.

Ziyang Duan, Albert Loo, Biswajit Sarkar, Shiyong Lu, Mark Van Loon, Subhra Bose

Proceedings of the 15th International Conference on Computer Applications in Industry and Engineering, 2002

2000

Semantic Conditions for Correctness at Different Isolation Levels.

Arthur J. Bernstein, Philip M. Lewis, Shiyong Lu

Proceedings of the 16th International Conference on Data Engineering, San Diego, California, USA, February 28, 2000

1999

Model Checking the Secure Electronic Transaction (SET) Protocol.

Shiyong Lu, Scott A. Smolka

Proceedings of the MASCOTS 1999, 1999