Youping Deng

According to our database1, Youping Deng authored at least 55 papers between 2004 and 2018.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2018
Risk-associated and pathway-based method to detect association with Alzheimer's disease.
I. J. Computational Biology and Drug Design, 2018

The emerging role of microRNA-4487/6845-3p in Alzheimer's disease pathologies is induced by Aβ25-35 triggered in SH-SY5Y cell.
BMC Systems Biology, 2018

Increased AURKA promotes cell proliferation and predicts poor prognosis in bladder cancer.
BMC Systems Biology, 2018

2017
Structure Modeling and Molecular Docking Studies of Schizophrenia Candidate Genes, Synapsins 2 (SYN2) and Trace Amino Acid Receptor (TAAR6).
Proceedings of the Bioinformatics Research and Applications - 13th International Symposium, 2017

2014
PTHGRN: unraveling post-translational hierarchical gene regulatory networks using PPI, ChIP-seq and gene expression data.
Nucleic Acids Research, 2014

Identification of genes and pathways involved in kidney renal clear cell carcinoma.
BMC Bioinformatics, 2014

Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms.
BMC Bioinformatics, 2014

Developing discriminate model and comparative analysis of differentially expressed genes and pathways for bloodstream samples of diabetes mellitus type 2.
BMC Bioinformatics, 2014

CMGRN: a web server for constructing multilevel gene regulatory networks using ChIP-seq and gene expression data.
Bioinformatics, 2014

2012
GRNN Ensemble Classifier for Lung Cancer Prognosis Using Only Demographic and TNM features.
Proceedings of the Complex Adaptive Systems 2012 Conference, 2012

Classifying Lung Cancer Recurrence Time Using Novel Ensemble Method with Gene Network based Input Models.
Proceedings of the Complex Adaptive Systems 2012 Conference, 2012

Gene order computation using Alzheimer's DNA microarray gene expression data and the ant colony optimisation algorithm.
IJDMB, 2012

2011
From genes to networks: in systematic points of view.
BMC Systems Biology, 2011

Exploring virus relationships based on virus-host protein-protein interaction network.
BMC Systems Biology, 2011

State Space Model with hidden variables for reconstruction of gene regulatory networks.
BMC Systems Biology, 2011

A transcriptional dynamic network during Arabidopsis thaliana pollen development.
BMC Systems Biology, 2011

Mass segmentation using a combined method for cancer detection.
BMC Systems Biology, 2011

Kernelized partial least squares for feature reduction and classification of gene microarray data.
BMC Systems Biology, 2011

Statistical methods on detecting differentially expressed genes for RNA-seq data.
BMC Systems Biology, 2011

Gene set analysis for longitudinal gene expression data.
BMC Bioinformatics, 2011

2010
Effects of cooling cornea by Low-Temperature Saline Washing on postoperative pain in Photorefractive Keratectomy.
I. J. Functional Informatics and Personalised Medicine, 2010

3D Protein structure prediction with genetic tabu search algorithm.
BMC Systems Biology, 2010

In vitro gene regulatory networks predict in vivo function of liver.
BMC Systems Biology, 2010

A novel gene network inference algorithm using predictive minimum description length approach.
BMC Systems Biology, 2010

2009
Gene Regulatory Network Inference Using Predictive Minimum Description Length Principle and Conditional Mutual Information.
Proceedings of the International Joint Conferences on Bioinformatics, 2009

Generation and Analysis of Expressed Sequence Tags from the Sheepshead Minnow (Cyprinodon Variegatus).
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009

Genomic Resources for Karenia brevis.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009

Plasma Lipidomic Profiling Reveals the Potential Biomarkers in Type 2 Diabetic Patients.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2009

2008
Novel implementation of conditional co-regulation by graph theory to derive co-expressed genes from microarray data.
BMC Bioinformatics, 2008

GOfetcher: a database with complex searching facility for gene ontology.
Bioinformatics, 2008

Creating a Workflow for Expressed Sequence Tags Analysis.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

Inferring Gene Regulatory Network of Yeast Cell-Cycle using Dynamic Bayesian Network.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

A Strategy for High Throughput Microarray Oligo Probe Design Using 454 and Sanger Sequencing Data of Eisenia fetida Expressed Sequence Tags.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008

2007
Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida.
BMC Bioinformatics, 2007

Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks.
BMC Bioinformatics, 2007

Parallel Training of Multi-class Support Vector Machines Using Sequential Minimal Optimization.
Proceedings of the 2007 International Conference on Machine Learning; Models, 2007

Web-Based Information Retrieval with Local and Global Link Analyis.
Proceedings of the 2007 International Conference on Information & Knowledge Engineering, 2007

Non-Monotonic Radio-Sensitivity over Tumor Volumes on Adjuvant Radio Therapy A New Insight on Cell Killing and Modeling.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

An Effective Interwoven Loop Design Application for Two-Channel Microarray Experiments.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Efficiency of Hybrid Normalization of Microarray Gene Expression: A Simulation Study.
Proceedings of the 21st International Conference on Advanced Information Networking and Applications (AINA 2007), 2007

2006
Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data.
BMC Bioinformatics, 2006

RiboaptDB: A Comprehensive Database of Ribozymes and Aptamers.
BMC Bioinformatics, 2006

SVM Classifier - a comprehensive java interface for support vector machine classification of microarray data.
BMC Bioinformatics, 2006

A Fourier Transformation based Method to Mine Peptide Space for Antimicrobial Activity.
BMC Bioinformatics, 2006

Development of computations in bioscience and bioinformatics and its application: review of the Symposium of Computations in Bioinformatics and Bioscience (SCBB06).
BMC Bioinformatics, 2006

Parallel Multicategory Support Vector Machines (PMC-SVM) for Classifying Microcarray Data.
Proceedings of the Interdisciplinary and Multidisciplinary Research in Computer Science, 2006

Identification of New Members of Hydrophobin Family Using Primary Structure Analysis.
Proceedings of the Interdisciplinary and Multidisciplinary Research in Computer Science, 2006

An Integrated Web-Based Model for Management, Analysis and Retrieval of EST Biological Information.
Proceedings of the Advanced Web and Network Technologies, and Applications, 2006

2005
Determination of cluster number in clustering microarray data.
Applied Mathematics and Computation, 2005

Parallel Virtual Screening for Prediction of Antimicrobial Activity Using Fourier Transforms.
Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, 2005

Markov Chain Correlation Based Clustering of Gene Expression Data.
Proceedings of the International Symposium on Information Technology: Coding and Computing (ITCC 2005), 2005

2004
Incremental genetic K-means algorithm and its application in gene expression data analysis.
BMC Bioinformatics, 2004

Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes.
BMC Bioinformatics, 2004

Computational identification of novel chitinase-like proteins in the Drosophila melanogaster genome.
Bioinformatics, 2004

FGKA: a Fast Genetic K-means Clustering Algorithm.
Proceedings of the 2004 ACM Symposium on Applied Computing (SAC), 2004


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