Simon D. W. Frost

Affiliations:
  • University of Cambridge, UK


According to our database1, Simon D. W. Frost authored at least 14 papers between 2005 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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In proceedings 
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PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2019
genieR: An R package for inference of demographic history of phylogenies.
J. Open Source Softw., 2019

2016
Gillespie.jl: Stochastic Simulation Algorithm in Julia.
J. Open Source Softw., 2016

2015
Measuring Asymmetry in Time-Stamped Phylogenies.
PLoS Comput. Biol., 2015

2013
Inferring the Source of Transmission with Phylogenetic Data.
PLoS Comput. Biol., 2013

2012
Simple Epidemiological Dynamics Explain Phylogenetic Clustering of HIV from Patients with Recent Infection.
PLoS Comput. Biol., 2012

2010
Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology.
Bioinform., 2010

2009
An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1.
PLoS Comput. Biol., 2009

2008
Spidermonkey: rapid detection of co-evolving sites using Bayesian graphical models.
Bioinform., 2008

2007
An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope.
PLoS Comput. Biol., 2007

Evolutionary Interactions between N-Linked Glycosylation Sites in the HIV-1 Envelope.
PLoS Comput. Biol., 2007

2006
Adaptation to Different Human Populations by HIV-1 Revealed by Codon-Based Analyses.
PLoS Comput. Biol., 2006

GARD: a genetic algorithm for recombination detection.
Bioinform., 2006

2005
HyPhy: hypothesis testing using phylogenies.
Bioinform., 2005

Datamonkey: rapid detection of selective pressure on individual sites of codon alignments.
Bioinform., 2005


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