Suely Oliveira

CoRR, 2024

2023

Finding, and Countering, Future Resistance using Bacterial Antibiotic Adversarial Genetic Algorithm (BAAGA).

[BibT_eX]

[DOI]

Proceedings of the International Joint Conference on Neural Networks, 2023

Using Feature Selection from XGBoost to Predict MIC Values with Neural Networks.

[BibT_eX]

[DOI]

Mariana Castanheira

Proceedings of the International Joint Conference on Neural Networks, 2023

Compound RNN to predict MICs using K-Mer Fingerprints and Antibiotic SMILES.

[BibT_eX]

[DOI]

Proceedings of the 14th ACM International Conference on Bioinformatics, 2023

2022

K-Mer Fingerprinting with RNN to predict MICs for K. pneumoniae.

[BibT_eX]

[DOI]

Mariana Castanheira

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021

Estimation of multidimensional item response theory models with correlated latent variables using variational autoencoders.

[BibT_eX]

[DOI]

Mach. Learn., 2021

Distributed Evolution of Deep Autoencoders.

[BibT_eX]

[DOI]

Xiaoyu Xing

Proceedings of the Intelligent Computing, 2021

Exploring Trade-offs in Parallel Beam-ACO.

[BibT_eX]

[DOI]

Proceedings of the 11th IEEE Annual Computing and Communication Workshop and Conference, 2021

Efficient Evolution of Variational Autoencoders.

[BibT_eX]

[DOI]

Proceedings of the 11th IEEE Annual Computing and Communication Workshop and Conference, 2021

Incorporating Item Response Theory into Knowledge Tracing.

[BibT_eX]

[DOI]

Geoffrey A. Converse

Shi Pu

Proceedings of the Artificial Intelligence in Education - 22nd International Conference, 2021

2020

Evolving deep autoencoders.

[BibT_eX]

[DOI]

Xiaoyu Xing

Proceedings of the GECCO '20: Genetic and Evolutionary Computation Conference, 2020

gBeam-ACO: a greedy and faster variant of Beam-ACO.

[BibT_eX]

[DOI]

Proceedings of the GECCO '20: Genetic and Evolutionary Computation Conference, 2020

An Evolutionary Approach to Variational Autoencoders.

[BibT_eX]

[DOI]

Proceedings of the 10th Annual Computing and Communication Workshop and Conference, 2020

A Scalable System for Neural Architecture Search.

[BibT_eX]

[DOI]

Proceedings of the 10th Annual Computing and Communication Workshop and Conference, 2020

Year, Location, and Species Information In Predicting MIC Values with Beta-Lactamase Genes.

[BibT_eX]

[DOI]

Mariana Castanheira

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020

2019

Distributed SmSVM Ensemble Learning.

[BibT_eX]

[DOI]

Proceedings of the Recent Advances in Big Data and Deep Learning, 2019

Parallelizing Basis Pursuit Denoising.

[BibT_eX]

[DOI]

Proceedings of the International Joint Conference on Neural Networks, 2019

Interpretable Variational Autoencoders for Cognitive Models.

[BibT_eX]

[DOI]

Proceedings of the International Joint Conference on Neural Networks, 2019

Variational Autoencoders for Baseball Player Evaluation.

[BibT_eX]

[DOI]

Proceedings of the Fuzzy Systems and Data Mining V, 2019

Two Simple Tricks for Fast Cache-Aware Parallel Particle Swarm Optimization.

[BibT_eX]

[DOI]

Proceedings of the IEEE Congress on Evolutionary Computation, 2019

Identifying Beta-Lactam Resistance with Neural Networks.

[BibT_eX]

[DOI]

Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

Autoencoders for Educational Assessment.

[BibT_eX]

[DOI]

Geoffrey A. Converse

Mariana Curi

Proceedings of the Artificial Intelligence in Education - 20th International Conference, 2019

2018

Smoothed Hinge Loss and ℓ1 Support Vector Machines.

[BibT_eX]

[DOI]

Proceedings of the 2018 IEEE International Conference on Data Mining Workshops, 2018

Efficient Basis Pursuit DeNoising via Active Sets and Homotopy.

[BibT_eX]

[DOI]

Proceedings of the Fuzzy Systems and Data Mining IV, 2018

2017

High quality multi-core multi-level algorithm for community detection.

[BibT_eX]

[DOI]

Rahil Sharma

Int. J. Comput. Sci. Eng., 2017

Community Detection Algorithm for Big Social Networks Using Hybrid Architecture.

[BibT_eX]

[DOI]

Rahil Sharma

Big Data Res., 2017

Concurrent MMBIRFinder.

[BibT_eX]

[DOI]

Proceedings of the 7th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2017

2016

Parallel Landscape Driven Data Reduction & Spatial Interpolation Algorithm for Big LiDAR Data.

[BibT_eX]

[DOI]

ISPRS Int. J. Geo Inf., 2016

Identification and prediction of functional protein modules using a bi-level community detection algorithm.

[BibT_eX]

[DOI]

Rahil Sharma

Int. J. Bioinform. Res. Appl., 2016

2015

Building Proofs - A Practical Guide

[BibT_eX]

[DOI]

WorldScientific, ISBN: 9789814641326, 2015

2012

Physically Accurate Granular flow Simulation.

[BibT_eX]

[DOI]

Proceedings of the International Conference on Computational Science, 2012

Analysis of nonlinear dynamics of vocal folds using high-speed video observation and biomechanical modeling.

[BibT_eX]

[DOI]

Digit. Signal Process., 2012

2011

Clustering for bioinformatics via matrix optimization.

[BibT_eX]

[DOI]

Proceedings of the ACM International Conference on Bioinformatics, 2011

2009

A spectral clustering algorithm for manufacturing cell formation.

[BibT_eX]

[DOI]

J. F. Ferreira Ribeiro

S. C. Seok

Comput. Ind. Eng., 2009

2008

ℋ-matrix preconditioners for symmetric saddle-point systems from meshfree discretization.

[BibT_eX]

[DOI]

Sabine Le Borne

Numer. Linear Algebra Appl., 2008

A matrix-based multilevel approach to identify functional protein modules.

[BibT_eX]

[DOI]

Int. J. Bioinform. Res. Appl., 2008

Implementation of an H-matrix Preconditioner.

[BibT_eX]

Proceedings of the 2008 International Conference on Scientific Computing, 2008

2007

Multilevel approaches for large-scale proteomic networks.

[BibT_eX]

[DOI]

S. C. Seok

Int. J. Comput. Math., 2007

An algebraic approach for <i>H</i>-matrix preconditioners.

[BibT_eX]

[DOI]

Computing, 2007

Hierarchical-Matrix Preconditioners for Parabolic Optimal Control Problems.

[BibT_eX]

[DOI]

Proceedings of the Computational Science, 2007

2006

Parallel Support Set Searches for Meshfree Methods.

[BibT_eX]

[DOI]

C. Cartwright

SIAM J. Sci. Comput., 2006

Triangular Clique Based Multilevel Approaches to Identify Protein Functional Modules.

[BibT_eX]

[DOI]

S. C. Seok

Proceedings of the High Performance Computing for Computational Science, 2006

A Multilevel Approach to Identify Functional Modules in a Yeast Protein-Protein Interaction Network.

[BibT_eX]

[DOI]

Proceedings of the Computational Science, 2006

2005

A Multi-level Approach for Document Clustering.

[BibT_eX]

[DOI]

Proceedings of the Computational Science, 2005

Spectral Document Clustering Algorithms with Different Data Structures.

[BibT_eX]

Proceedings of The 2005 International Conference on Scientific Computing, 2005

2004

Algebraic multigrid (AMG) for saddle point systems from meshfree discretizations.

[BibT_eX]

[DOI]

K. H. Leem

Numer. Linear Algebra Appl., 2004

2002

Semidefinite Programmingfor Graph Partitioning with Preferencesin Data Distribution.

[BibT_eX]

[DOI]

Proceedings of the High Performance Computing for Computational Science, 2002

A Subspace Semidefinite Programming for Spectral Graph Partitioning.

[BibT_eX]

[DOI]

Proceedings of the Computational Science - ICCS 2002, 2002

2001

Exact Prediction of QR Fill-In by Row-Merge Trees.

[BibT_eX]

[DOI]

SIAM J. Sci. Comput., 2001

A New Efficient Parallel Algorithm for Computing Eigenvalues of Symmetric Tridiagonal Matrices.

[BibT_eX]

Donald K. Friesen

Jingyu Zhang

Proceedings of the Tenth SIAM Conference on Parallel Processing for Scientific Computing, 2001

A Parallel Quadtree Algorithm for Efficient Assembly of Stiffness Matrices in Meshfree Galerkin Methods.

[BibT_eX]

[DOI]

C. Cartwright

Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01), 2001

2000

Finding Sets Covering a Point with Application to Mesh-Free Galerkin Methods.

[BibT_eX]

[DOI]

Xiaoxu Han

SIAM J. Comput., 2000

Analysis of Different Partitioning Schemes for Parallel Gram-schmidt Algorithms.

[BibT_eX]

[DOI]

Parallel Algorithms Appl., 2000

A Multilevel Algorithm for Spectral Partitioning with Extended Eigen-Models.

[BibT_eX]

[DOI]

Proceedings of the Parallel and Distributed Processing, 2000

1999

A Graph Based Davidson Algorithm for the Graph Partitioning Problem.

[BibT_eX]

[DOI]

Michael Holzrichter

Int. J. Found. Comput. Sci., 1999

On the Convergence Rate of a Preconditioned Subspace Eigensolver.

[BibT_eX]

[DOI]

Computing, 1999

A Graph Based Method for Generating the Fiedler Vector of Irregular Problems.

[BibT_eX]

[DOI]

Michael Holzrichter

Proceedings of the Parallel and Distributed Processing, 1999

1998

A new parallel chasing algorithm for transforming arrowhead matrices to tridiagonal form.

[BibT_eX]

[DOI]

Math. Comput., 1998

A Parallel Solver for Extreme Eigenpairs.

[BibT_eX]

[DOI]

Leonardo Borges

Proceedings of the Euro-Par '98 Parallel Processing, 1998

1997

An Efficient Parallel Implementation of a New Chasing Algorithm.

[BibT_eX]

Z. Chen

Yuanhua Deng

Proceedings of the Eighth SIAM Conference on Parallel Processing for Scientific Computing, 1997

New Partitioning Schemes for Parallel Modified Gram-Schmidt Orthogonalization.

[BibT_eX]

[DOI]

Proceedings of the 1997 International Symposium on Parallel Architectures, 1997

1996

Parallel Multigrid Methods for Transport Equations: The Anisotropic Case.

[BibT_eX]

[DOI]