Thibaut Jombart

According to our database, Thibaut Jombart authored at least 12 papers between 2008 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics.

Christopher I. Jarvis, Amy Gimma, Flavio Finger, Tim P. Morris, Jennifer A. Thompson, Olivier Le Polain de Waroux, W. John Edmunds, Sebastian Funk, Thibaut Jombart

PLoS Comput. Biol., 2022

2021

Identifying and Addressing 6 Key Questions when Using Data Driven Scrum.

Jeffrey S. Saltz, Alex Sutherland, Thibaut Jombart

Proceedings of the 2021 IEEE International Conference on Big Data (Big Data), 2021

2019

Bayesian inference of transmission chains using timing of symptoms, pathogen genomes and contact data.

Finlay Campbell, Anne Cori, Neil M. Ferguson, Thibaut Jombart

PLoS Comput. Biol., 2019

Epidemic curves made easy using the R package <i>incidence</i>.

Zhian N. Kamvar, Jun Cai, Juliet R. C. Pulliam, Jakob Schumacher, Thibaut Jombart

F1000Research, 2019

2018

A graph-based evidence synthesis approach to detecting outbreak clusters: An application to dog rabies.

Anne Cori, Pierre Nouvellet, Tini Garske, Hervé Bourhy, Emmanuel Nakouné, Thibaut Jombart

PLoS Comput. Biol., 2018

<i>epicontacts</i>: Handling, visualisation and analysis of epidemiological contacts.

V. P. Nagraj, Nistara Randhawa, Finlay Campbell, Thomas Crellen, Bertrand Sudre, Thibaut Jombart

F1000Research, 2018

epiflows: an R package for risk assessment of travel-related spread of disease.

Paula Moraga, Ilaria Dorigatti, Zhian N. Kamvar, Pawel Piatkowski, Salla E. Toikkanen, V. P. Nagraj, Christl A. Donnelly, Thibaut Jombart

F1000Research, 2018

outbreaker2: a modular platform for outbreak reconstruction.

Finlay Campbell, Xavier Didelot, Richard G. FitzJohn, Neil M. Ferguson, Anne Cori, Thibaut Jombart

BMC Bioinform., 2018

2014

Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data.

Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson

PLoS Comput. Biol., 2014

2011

<i>adegenet 1.3-1</i>: new tools for the analysis of genome-wide SNP data.

Thibaut Jombart, Ismaïl Ahmed

Bioinform., 2011

2010

<i>adephylo</i>: new tools for investigating the phylogenetic signal in biological traits.

Thibaut Jombart, François Balloux, Stéphane Dray

Bioinform., 2010

2008

<i>adegenet</i>: a R package for the multivariate analysis of genetic markers.

Thibaut Jombart

Bioinform., 2008