Thomas Donoghue

According to our database, Thomas Donoghue authored at least 14 papers between 2017 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Julia Guiomar Niso Galán, Richard M. Köhler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Laetitia Fesselier, Jonathan Vanhoecke, Ford McDonald, Pierre Guetschel, Mara Wolter, Julius Welzel, Kaare B. Mikkelsen, Amaia Benitez Andonegui, Thomas Hartmann, Aaron Earle-Richardson, William F. Turner, Christian O'Reilly, Berk Gerçek, Matthias Dold, Harrison Ritz, Alex Lopez Marquez, Nathan Azrak, Bruno Aristimunha, Kalle Mäkelä, Alexandre Gramfort, Mainak Jas

Dataset, December, 2025

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Julia Guiomar Niso Galán, Richard M. Köhler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Laetitia Fesselier, Jonathan Vanhoecke, Ford McDonald, Pierre Guetschel, Mara Wolter, Julius Welzel, Kaare B. Mikkelsen, Amaia Benitez Andonegui, Thomas Hartmann, Aaron Earle-Richardson, William F. Turner, Christian O'Reilly, Berk Gerçek, Matthias Dold, Harrison Ritz, Nathan Azrak, Alexandre Gramfort, Mainak Jas

Dataset, September, 2025

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Julia Guiomar Niso Galán, Richard M. Köhler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Laetitia Fesselier, Jonathan Vanhoecke, Ford McDonald, Pierre Guetschel, Mara Wolter, Julius Welzel, Kaare B. Mikkelsen, Amaia Benitez Andonegui, Thomas Hartmann, Aaron Earle-Richardson, William F. Turner, Christian O'Reilly, Berk Gerçek, Matthias Dold, Harrison Ritz, Nathan Azrak, Alexandre Gramfort, Mainak Jas

Dataset, September, 2025

Algorithmic representations in the human brain that underlie schema generalisation.

Svenja Küchenhoff, Alon Baram, Mohamady El-Gaby, Mathias Sablé-Meyer, Adam Harris, Jacob J. W. Bakermans, Shraddha Shah, Eleonora Bartoli, Andrew J. Watrous, Adrish Anand, Thomas Donoghue, Sandra Maesta-Pereira, Uros Topalovic, John Sakon, Elliot H. Smith

Proceedings of the 47th Annual Meeting of the Cognitive Science Society, 2025

2024

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Julia Guiomar Niso Galán, Richard M. Köhler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Laetitia Fesselier, Jonathan Vanhoecke, Ford McDonald, Pierre Guetschel, Mara Wolter, Julius Welzel, Kaare B. Mikkelsen, Amaia Benitez Andonegui, Thomas Hartmann, Aaron Earle-Richardson, William F. Turner, Alexandre Gramfort, Mainak Jas

Dataset, November, 2024

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Guiomar Niso, Richard Koehler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Laetitia Fesselier, Jonathan Vanhoecke, Ford McDonald, Pierre Guetschel, Mara Wolter, Julius Welzel, Alexandre Gramfort, Mainak Jas

Dataset, June, 2024

2023

spiketools: a Python package for analyzing single-unit neural activity.

Thomas Donoghue, Sandra Maesta-Pereira, Claire Zhixian Han, Salman Ehtesham Qasim, Joshua Jacobs

J. Open Source Softw., November, 2023

2022

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, J. Guiomar Niso, Richard Koehler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Moritz Gerster, Alexandre Gramfort, Mainak Jas

Dataset, December, 2022

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, J. Guiomar Niso, Richard Koehler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Alexandre Gramfort, Mainak Jas

Dataset, October, 2022

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis.

Stefan Appelhoff, Matthew Sanderson, Teon L. Brooks, Marijn van Vliet, Romain Quentin, Chris Holdgraf, Maximilien Chaumon, Ezequiel Mikulan, Kambiz Tavabi, Richard Höchenberger, Dominik Welke, Clemens Brunner, Alexander Rockhill, Eric Larson, Adam Li, Ariel Rokem, Daniel McCloy, Austin J. Hurst, Diego Lozano-Soldevilla, Eduard Ort, Ethan Knights, Evgenii Kalenkovich, Franziska von Albedyll, Fu-Te Wong, Jean-Rémi King, Julia Guiomar Niso Galán, Richard Koehler, Robert Luke, Simon Kern, Sin Kim, Sophie Herbst, Swastika Gupta, Thomas Donoghue, Yorguin José Mantilla Ramos, Scott Huberty, Mathieu Scheltienne, Anand Saini, Bruno Hebling Vieira, Denis A. Engemann, Alexandre Gramfort, Mainak Jas

Dataset, October, 2022

2019

LISC: A Python Package for Scientific Literature Collection and Analysis.

Thomas Donoghue

J. Open Source Softw., 2019

NeuroDSP: A package for neural digital signal processing.

Scott Cole, Thomas Donoghue, Richard Gao, Bradley Voytek

J. Open Source Softw., 2019

2018

Confidence Levels in Scientific Writing: Automated Mining of Primary Literature and Press Releases.

Will Fox, Thomas Donoghue

Proceedings of the 40th Annual Meeting of the Cognitive Science Society, 2018

2017

Automated Generation of Cognitive Ontology via Web Text-Mining.

Richard Gao, Thomas Donoghue, Bradley Voytek

Proceedings of the 39th Annual Meeting of the Cognitive Science Society, 2017