Vanessa López-Marrero

According to our database, Vanessa López-Marrero authored at least 9 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.

Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Shinjae Yoo, Shantenu Jha

J. Comput. Biol., 2025

2024

Density estimation via measure transport: Outlook for applications in the biological sciences.

Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo

Stat. Anal. Data Min., June, 2024

Towards accelerating particle-resolved direct numerical simulation with neural operators.

Mohammad Atif, Vanessa López-Marrero, Tao Zhang, Abdullah Sharfuddin, Kwangmin Yu, Jiaqi Yang, Fan Yang, Foluso Ladeinde, Yangang Liu, Meifeng Lin, Lingda Li

Stat. Anal. Data Min., June, 2024

Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.

Xihaier Luo, Seyednami Niyakan, Patrick R. Johnstone, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Shantenu Jha, Byung-Jun Yoon

Frontiers Bioinform., 2024

Multi-Function Multi-Way Analog Technology for Sustainable Machine Intelligence Computation.

Vassilis Kalantzis, Mark S. Squillante, Shashanka Ubaru, Tayfun Gokmen, Chai Wah Wu, Anshul Gupta, Haim Avron, Tomasz Nowicki, Malte J. Rasch, O. Murat Onen, Vanessa López-Marrero, Effendi Leobandung, Yasuteru Kohda, Wilfried Haensch, Lior Horesh

CoRR, 2024

Fourier neural operators for spatiotemporal dynamics in two-dimensional turbulence.

Mohammad Atif, Pulkit Dubey, Pratik P. Aghor, Vanessa López-Marrero, Tao Zhang, Abdullah Sharfuddin, Kwangmin Yu, Fan Yang, Foluso Ladeinde, Yangang Liu, Meifeng Lin, Lingda Li

Proceedings of the SC24-W: Workshops of the International Conference for High Performance Computing, 2024

2023

Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.

Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander

CoRR, 2023

Automated Extraction of Molecular Interactions and Pathway Knowledge using Large Language Model, Galactica: Opportunities and Challenges.

Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander

Proceedings of the 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, 2023

2022

Comprehensive analysis of gene expression profiles to radiation exposure reveals molecular signatures of low-dose radiation response.

Xihaier Luo, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Byung-Jun Yoon

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022