Virgilio G. Ponferrada

According to our database, Virgilio G. Ponferrada authored at least 7 papers between 2013 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database.

Joshua D. Fortriede, Troy J. Pells, Stanley Chu, Praneet Chaturvedi, Dong Zhou Wang, Malcolm E. Fisher, Christina James-Zorn, Ying Wang, Mardi J. Nenni, Kevin A. Burns, Vaneet Lotay, Virgilio G. Ponferrada, Kamran Karimi, Aaron M. Zorn, Peter D. Vize

Nucleic Acids Res., 2020

2018

Xenbase: a genomic, epigenomic and transcriptomic model organism database.

Kamran Karimi, Joshua D. Fortriede, Vaneet Lotay, Kevin A. Burns, Dong Zhou Wang, Malcolm E. Fisher, Troy J. Pells, Christina James-Zorn, Ying Wang, Virgilio G. Ponferrada, Stanley Chu, Praneet Chaturvedi, Aaron M. Zorn, Peter D. Vize

Nucleic Acids Res., 2018

Visualization of Gene Expression and Expression as a Phenotype with the XPO, XAO and DO using a Combination of Experimental Data Sources.

Troy J. Pells, Malcolm E. Fisher, Erik Segerdell, Joshua D. Fortriede, Kevin A. Burns, Stanley Chu, Praneet Chaturvedi, Christina James-Zorn, Vaneet Lotay, Mardi J. Nenni, Virgilio G. Ponferrada, Dong Zhou Wang, Ying Wang, Kamran Karimi, Peter D. Vize, Aaron M. Zorn

Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2015

Xenbase, the <i>Xenopus</i> model organism database; new virtualized system, data types and genomes.

J. Brad Karpinka, Joshua D. Fortriede, Kevin A. Burns, Christina James-Zorn, Virgilio G. Ponferrada, Jacqueline Lee, Kamran Karimi, Aaron M. Zorn, Peter D. Vize

Nucleic Acids Res., 2015

2013

Xenbase: expansion and updates of the <i>Xenopus</i> model organism database.

Christina James-Zorn, Virgilio G. Ponferrada, Chris Jarabek, Kevin A. Burns, Erik Segerdell, Jacqueline Lee, Kevin A. Snyder, Bishnu Bhattacharyya, J. Brad Karpinka, Joshua D. Fortriede, Jeff B. Bowes, Aaron M. Zorn, Peter D. Vize

Nucleic Acids Res., 2013

Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.

Erik Segerdell, Virgilio G. Ponferrada, Christina James-Zorn, Kevin A. Burns, Joshua D. Fortriede, Wasila M. Dahdul, Peter D. Vize, Aaron M. Zorn

J. Biomed. Semant., 2013

The Xenbase literature curation process.

Jeff B. Bowes, Kevin A. Snyder, Christina James-Zorn, Virgilio G. Ponferrada, Chris Jarabek, Kevin A. Burns, Bishnu Bhattacharyya, Aaron M. Zorn, Peter D. Vize

Database J. Biol. Databases Curation, 2013