Wataru Shinoda

According to our database, Wataru Shinoda authored at least 8 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2024

pSPICA Force Field Extended for Proteins and Peptides.

Yusuke Miyazaki, Wataru Shinoda

J. Chem. Inf. Model., 2024

2019

Heteroaryldihydropyrimidines Alter Capsid Assembly By Adjusting the Binding Affinity and Pattern of the Hepatitis B Virus Core Protein.

Huihui Liu, Susumu Okazaki, Wataru Shinoda

J. Chem. Inf. Model., 2019

tSPICA: Temperature- and Pressure-Dependent Coarse-Grained Force Field for Organic Molecules.

Mark Z. Griffiths, Wataru Shinoda

J. Chem. Inf. Model., 2019

Development of dissociative force field for all-atomistic molecular dynamics calculation of fracture of polymers.

Kazushi Fujimoto, Rajadeep Singh Payal, Tomonori Hattori, Wataru Shinoda, Masayuki Nakagaki, Shigeyoshi Sakaki, Susumu Okazaki

J. Comput. Chem., 2019

2018

Identification of Factors Promoting HBV Capsid Self-Assembly by Assembly-Promoting Antivirals.

Soumya Lipsa Rath, Huihui Liu, Susumu Okazaki, Wataru Shinoda

J. Chem. Inf. Model., 2018

2015

Precise calculation of the local pressure tensor in Cartesian and spherical coordinates in LAMMPS.

Takenobu Nakamura, Shuhei Kawamoto, Wataru Shinoda

Comput. Phys. Commun., 2015

2008

Efficient free energy calculation of water across lipid membranes.

Keiko Shinoda, Wataru Shinoda, Masuhiro Mikami

J. Comput. Chem., 2008

2003

Rigid-body dynamics in the isothermal-isobaric ensemble: A test on the accuracy and computational efficiency.

Wataru Shinoda, Masuhiro Mikami

J. Comput. Chem., 2003