Wayne Pfeiffer

According to our database, Wayne Pfeiffer authored at least 20 papers between 1990 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

RAxML Grove: an empirical phylogenetic tree database.

Dimitri Höhler, Wayne Pfeiffer, Vassilios Ioannidis, Heinz Stockinger, Alexandros Stamatakis

Bioinform., 2022

2021

Expanse: Computing without Boundaries: Architecture, Deployment, and Early Operations Experiences of a Supercomputer Designed for the Rapid Evolution in Science and Engineering.

Shawn Strande, Haisong Cai, Mahidhar Tatineni, Wayne Pfeiffer, Christopher Irving, Amit Majumdar, Dmitry Mishin, Robert S. Sinkovits, Mike Norman, Nicole Wolter, Trevor Cooper, Ilkay Altintas, Marty Kandes, Ismael Pérez, Manu Shantharam, Mary P. Thomas, Subhashini Sivagnanam, Thomas Hutton

Proceedings of the PEARC '21: Practice and Experience in Advanced Research Computing, 2021

2017

Comet: Tales from the Long Tail: Two Years In and 10, 000 Users Later.

Shawn Strande, Haisong Cai, Trevor Cooper, Karen Flammer, Christopher Irving, Gregor von Laszewski, Amitava Majumdar, Dmitry Mishin, Philip M. Papadopoulos, Wayne Pfeiffer, Robert S. Sinkovits, Mahidhar Tatineni, Rick Wagner, Fugang Wang, Nancy Wilkins-Diehr, Nicole Wolter, Michael L. Norman

Proceedings of the Practice and Experience in Advanced Research Computing 2017: Sustainability, 2017

Performance Characterization and Optimization Assessment of Bioinformatics Applications.

Pietro Cicotti, Wayne Pfeiffer, Madhu Gujral, Robert S. Sinkovits, Shawn Strande, Ron Hawkins

Proceedings of the Practice and Experience in Advanced Research Computing 2017: Sustainability, 2017

2016

User behavior and usage patterns for a highly accessed science gateway.

Mark A. Miller, Terri Schwartz, Wayne Pfeiffer

Proceedings of the XSEDE16 Conference on Diversity, 2016

2015

Group-based variant calling leveraging next-generation supercomputing for large-scale whole-genome sequencing studies.

Kristopher Standish, Tristan M. Carland, Glenn K. Lockwood, Wayne Pfeiffer, Mahidhar Tatineni, C. Huang, Sarah Lamberth, Yauheniya Cherkas, Carrie Brodmerkel, Ed Jaeger, Lance Smith, Gunaretnam Rajagopal, Mark Curran, Nicholas J. Schork

BMC Bioinform., 2015

2014

Gateways to Discovery: Cyberinfrastructure for the Long Tail of Science.

Richard Lee Moore, Chaitan Baru, Diane Baxter, Geoffrey Charles Fox, Amitava Majumdar, Philip M. Papadopoulos, Wayne Pfeiffer, Robert S. Sinkovits, Shawn Strande, Mahidhar Tatineni, Richard P. Wagner, Nancy Wilkins-Diehr, Michael L. Norman

Proceedings of the Annual Conference of the Extreme Science and Engineering Discovery Environment, 2014

2013

Embedding CIPRES science gateway capabilities in phylogenetics software environments.

Mark A. Miller, Terri Schwartz, Wayne Pfeiffer

Proceedings of the Extreme Science and Engineering Discovery Environment: Gateway to Discovery, 2013

2012

The CIPRES science gateway: enabling high-impact science for phylogenetics researchers with limited resources.

Mark A. Miller, Wayne Pfeiffer, Terri Schwartz

Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment, 2012

2011

Trestles: a high-productivity HPC system targeted to modest-scale and gateway users.

Richard Lee Moore, David L. Hart, Wayne Pfeiffer, Mahidhar Tatineni, Kenneth Yoshimoto, William S. Young

Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery, 2011

The CIPRES science gateway: a community resource for phylogenetic analyses.

Mark A. Miller, Wayne Pfeiffer, Terri Schwartz

Proceedings of the 2011 TeraGrid Conference - Extreme Digital Discovery, 2011

2010

Hybrid MPI/Pthreads parallelization of the RAxML phylogenetics code.

Wayne Pfeiffer, Alexandros Stamatakis

Proceedings of the 24th IEEE International Symposium on Parallel and Distributed Processing, 2010

2008

Modeling and predicting application performance on parallel computers using HPC challenge benchmarks.

Wayne Pfeiffer, Nicholas J. Wright

Proceedings of the 22nd IEEE International Symposium on Parallel and Distributed Processing, 2008

2006

Marching Towards Nirvana: Configurations for Very High Performance Parallel File Systems.

Phil Andrews, Chris Jordan, Wayne Pfeiffer

Proceedings of the 2006 IEEE International Conference on Cluster Computing, 2006

Achieving High Performance on the BlueGene/L Supercomputer.

George S. Almási, Gyan Bhanot, Siddhartha Chatterjee, Alan Gara, John A. Gunnels, Manish Gupta, Amy Henning, José E. Moreira, James C. Sexton, Bob Walkup, Alessandro Curioni, Charles Archer, Leonardo R. Bachega, Bor Chan, Bruce Curtis, Sharon Brunett, Giri Chukkapalli, Robert Harkness, Wayne Pfeiffer

Proceedings of the Parallel Processing for Scientific Computing, 2006

2004

Memory Performance Model for Loops and Kernels on Power3 Processors.

Wayne Pfeiffer

Proceedings of the 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), 2004

1998

Architecture.

Paul Messina, David E. Culler, Wayne Pfeiffer, William Martin, J. Tinsley Oden, Gary Smith

Commun. ACM, 1998

1994

Findings of the joint NSF-NASA initiative in evaluation.

Steven Hotovy, Wayne Pfeiffer, Thomas L. Sterling

Proceedings of the Proceedings Supercomputing '94, 1994

1990

Benchmarking and optimization of scientific codes on the CRAY X-MP, CRAY-2, and SCS-40 vector computers.

Wayne Pfeiffer, Arnold Alagar, Anke Kamrath, Robert H. Leary, Jack M. Rogers

J. Supercomput., 1990

Benchmarking Advanced Architecture Computers.

Paul Messina, Clive F. Baillie, Edward W. Felten, Paul G. Hipes, Ray Williams, Arnold Alagar, Anke Kamrath, Robert H. Leary, Wayne Pfeiffer, Jack M. Rogers, David W. Walker

Concurr. Pract. Exp., 1990