Xiaotao Shen

According to our database, Xiaotao Shen authored at least 12 papers between 2019 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Bridging Sequence and Graph Structure for Epigenetic Age Prediction.

Yao Li, Xikun Zhang, Xiaotao Shen, Sonika Tyagi, Xin Zheng, Jiaxing Huang, Feng Xia

CoRR, May, 2026

Learning Multi-Relational Graph Representations for DNA Methylation-Based Biological Age Estimation.

Qing Qing, Xikun Zhang, Zhongyuan Zhang, Jiarui Liu, Xingtong Yu, Xiaotao Shen, Ziqi Xu, Qixin Zhang, Zhe Wang, Renqiang Luo

CoRR, May, 2026

MetaNet: a scalable and integrated tool for reproducible omics network analysis.

Chen Peng, Liuyiqi Jiang, Zinuo Huang, Xin Wei, Xiaoping Zhu, Zhen Liu, Qiong Chen, Xiaotao Shen, Peng Gao, Chao Jiang

Bioinform., 2026

Kun-peng enables scalable and accurate pan-domain metagenomic classification.

Qiong Chen, Boliang Zhang, Chen Peng, Jiajun Huang, Zhen Liu, Xiaotao Shen, Chao Jiang

Briefings Bioinform., 2026

2025

Longitudinal urine metabolic profiling and gestational age prediction in human pregnancy.

Xiaotao Shen, Songjie Chen, Liang Liang, Monika Avina, Hanyah Zackriah, Laura Jelliffe-Pawlowski, Larry Rand, Michael P. Snyder

Briefings Bioinform., January, 2025

2024

Generalized reporter score-based enrichment analysis for omics data.

Chen Peng, Qiong Chen, Shangjin Tan, Xiaotao Shen, Chao Jiang

Briefings Bioinform., May, 2024

2023

Semi-supervised Cooperative Learning for Multiomics Data Fusion.

Daisy Yi Ding, Xiaotao Shen, Michael Snyder, Robert Tibshirani

Proceedings of the Machine Learning for Multimodal Healthcare Data, 2023

2022

massDatabase: utilities for the operation of the public compound and pathway database.

Xiaotao Shen, Chuchu Wang, Michael P. Snyder

Bioinform., 2022

metID: an R package for automatable compound annotation for LC-MS-based data.

Xiaotao Shen, Si Wu, Liang Liang, Songjie Chen, Kévin Contrepois, Zheng-Jiang Zhu, Michael P. Snyder

Bioinform., 2022

Deep learning-based pseudo-mass spectrometry imaging analysis for precision medicine.

Xiaotao Shen, Wei Shao, Chuchu Wang, Liang Liang, Songjie Chen, Sai Zhang, Mirabela Rusu, Michael P. Snyder

Briefings Bioinform., 2022

2019

LipidIMMS Analyzer: integrating multi-dimensional information to support lipid identification in ion mobility - mass spectrometry based lipidomics.

Zhiwei Zhou, Xiaotao Shen, Xi Chen, Jia Tu, Xin Xiong, Zheng-Jiang Zhu

Bioinform., 2019

MetFlow: an interactive and integrated workflow for metabolomics data cleaning and differential metabolite discovery.

Xiaotao Shen, Zheng-Jiang Zhu

Bioinform., 2019