Xinghua Lu

Orcid: 0000-0003-3137-8586

According to our database1, Xinghua Lu authored at least 47 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
SAPVAD: An Efficient Voice Activity Detection Model Based on Spectral Attention and Parallel Structure.
Proceedings of the 16th International Congress on Image and Signal Processing, 2023

2022
An individualized causal framework for learning intercellular communication networks that define microenvironments of individual tumors.
PLoS Comput. Biol., December, 2022

Robust and accurate estimation of cellular fraction from tissue omics data via ensemble deconvolution.
Bioinform., 2022

2021
A full freedom pose measurement method for industrial robot based on reinforcement learning algorithm.
Soft Comput., 2021

Network data security sharing system based on blockchain.
Multim. Tools Appl., 2021

Understanding Heart-Failure Patients EHR Clinical Features via SHAP Interpretation of Tree-Based Machine Learning Model Predictions.
CoRR, 2021

Understanding Heart-Failure Patients EHR Clinical Features via SHAP Interpretation of Tree-Based Machine Learning Model Predictions.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
Explicit representation of protein activity states significantly improves causal discovery of protein phosphorylation networks.
BMC Bioinform., 2020

From Genome to Phenome: Predicting Multiple Cancer Phenotypes Based on Somatic GenomicAlterations via the Genomic Impact Transformer.
Proceedings of the Pacific Symposium on Biocomputing 2020, 2020

Predicting Drug Sensitivity of Cancer Cell Lines via Collaborative Filtering with Contextual Attention.
Proceedings of the Machine Learning for Healthcare Conference, 2020

Learning Latent Causal Structures with a Redundant Input Neural Network.
Proceedings of the 2020 KDD Workshop on Causal Discovery (CD@KDD 2020), 2020

2019
Systematic discovery of the functional impact of somatic genome alterations in individual tumors through tumor-specific causal inference.
PLoS Comput. Biol., 2019

Supervised Vector Quantized Variational Autoencoder for Learning Interpretable Global Representations.
CoRR, 2019

Probing Biomedical Embeddings from Language Models.
CoRR, 2019

Integrating data and knowledge to identify functional modules of genes: a multilayer approach.
BMC Bioinform., 2019

PubMedQA: A Dataset for Biomedical Research Question Answering.
Proceedings of the 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing, 2019

Deep Contextualized Biomedical Abbreviation Expansion.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

2018
Research on risk management of military action.
Proceedings of the 2018 International Conference on Information Management & Management Science, 2018

Research on the Problem of the Intuitive Decision Making.
Proceedings of the 2nd International Conference on E-Education, 2018

High Precision Detection System of Circuit Board Based on Image Location.
Proceedings of the Advanced Hybrid Information Processing, 2018

2017
Revealing common disease mechanisms shared by tumors of different tissues of origin through semantic representation of genomic alterations and topic modeling.
BMC Genom., 2017

Unsupervised deep learning reveals prognostically relevant subtypes of glioblastoma.
BMC Bioinform., 2017

2016
Learning a hierarchical representation of the yeast transcriptomic machinery using an autoencoder model.
BMC Bioinform., 2016

An exact algorithm for finding cancer driver somatic genome alterations: the weighted mutually exclusive maximum set cover problem.
Algorithms Mol. Biol., 2016

2015
Identifying Driver Genomic Alterations in Cancers by Searching Minimum-Weight, Mutually Exclusive Sets.
PLoS Comput. Biol., 2015

基于定量递归联合熵特征重构的缓冲区流量预测算法 (Traffic Prediction Algorithm in Buffer Based on Recurrence Quantification Union Entropy Feature Reconstruction).
计算机科学, 2015

The center for causal discovery of biomedical knowledge from big data.
J. Am. Medical Informatics Assoc., 2015

Knowledge transfer via classification rules using functional mapping for integrative modeling of gene expression data.
BMC Bioinform., 2015

Trans-species learning of cellular signaling systems with bimodal deep belief networks.
Bioinform., 2015

2014
An exact algorithm for the weighed mutually exclusive maximum set cover problem.
CoRR, 2014

2013
An exact algorithm with the time complexity of $O^*(1.299^m)$ for the weighed mutually exclusive set cover problem
CoRR, 2013

Using graph model to find transcription factor modules: the hitting set problem and an exact algorithm.
Algorithms Mol. Biol., 2013

2012
Revealing functionally coherent subsets using a spectral clustering and an information integration approach.
BMC Syst. Biol., 2012

Signaling network prediction by the Ontology Fingerprint enhanced Bayesian network.
BMC Syst. Biol., 2012

Improving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological information.
BMC Genom., 2012

2011
A graph model and an exact algorithm for finding transcription factor modules.
Proceedings of the ACM International Conference on Bioinformatics, 2011

2010
Assessing the functional coherence of gene sets with metrics based on the Gene Ontology graph.
Bioinform., 2010

Identifying informative subsets of the Gene Ontology with information bottleneck methods.
Bioinform., 2010

2009
Feature selection for fMRI-based deception detection.
BMC Bioinform., 2009

2008
Multi-label literature classification based on the Gene Ontology graph.
BMC Bioinform., 2008

2006
Research Paper: Enhancing Text Categorization with Semantic-enriched Representation and Training Data Augmentation.
J. Am. Medical Informatics Assoc., 2006

Identifying biological concepts from a protein-related corpus with a probabilistic topic model.
BMC Bioinform., 2006

A multivariate prediction model for microarray cross-hybridization.
BMC Bioinform., 2006

Real-time Health Information Acquisition and Alarm System Based on Bluetooth and GPRS Communication Technologies.
Proceedings of the IEEE International Conference on Systems, 2006

2005
UIUC/MUSC at TREC 2005 Genomics Track.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

2004
Automatic annotation of protein motif function with Gene Ontology terms.
BMC Bioinform., 2004

Modeling Cellular Processes with Variational Bayesian Cooperative Vector Quantizer.
Proceedings of the Biocomputing 2004, 2004


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