Yang Zhang

According to our database, Yang Zhang authored at least 16 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Discovery of Potent Selective HDAC6 Inhibitors with 5-Phenyl-1<i>H</i>-indole Fragment: Virtual Screening, Rational Design, and Biological Evaluation.

Xuedong Li, Chengzhao Wang, Xu Chai, Xingang Liu, Kening Qiao, Yan Fu, Yanzhao Jin, Qingzhong Jia, Feng Zhu, Yang Zhang

J. Chem. Inf. Model., 2024

ACVPred: Enhanced prediction of anti-coronavirus peptides by transfer learning combined with data augmentation.

Yi Xu, Tianyuan Liu, Yu Yang, Juanjuan Kang, Liping Ren, Hui Ding, Yang Zhang

Future Gener. Comput. Syst., 2024

Attention is all you need: utilizing attention in AI-enabled drug discovery.

Yang Zhang, Caiqi Liu, Mujiexin Liu, Tianyuan Liu, Hao Lin, Cheng-Bing Huang, Lin Ning

Briefings Bioinform., 2024

2023

MetaboliteCOVID: A manually curated database of metabolite markers for COVID-19.

Liping Ren, Lin Ning, Yu Yang, Ting Yang, Xinyu Li, Shanshan Tan, Peixin Ge, Shun Li, Nanchao Luo, Pei Tao, Yang Zhang

Comput. Biol. Medicine, December, 2023

2022

VARIDT 2.0: structural variability of drug transporter.

Tingting Fu, Fengcheng Li, Yang Zhang, Jiayi Yin, Wenqi Qiu, Xuedong Li, Xingang Liu, Wenwen Xin, Chengzhao Wang, Lushan Yu, Jianqing Gao, Qingchuan Zheng, Su Zeng, Feng Zhu

Nucleic Acids Res., 2022

PSnoD: identifying potential snoRNA-disease associations based on bounded nuclear norm regularization.

Zijie Sun, Qinlai Huang, Yuhe Yang, Shihao Li, Hao Lv, Yang Zhang, Hao Lin, Lin Ning

Briefings Bioinform., 2022

iRice-MS: An integrated XGBoost model for detecting multitype post-translational modification sites in rice.

Hao Lv, Yang Zhang, Jia-Shu Wang, Shi-Shi Yuan, Zi-Jie Sun, Fu-Ying Dao, Zheng-Xing Guan, Hao Lin, Ke-Jun Deng

Briefings Bioinform., 2022

2021

Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis.

Yang Zhang, Tianyuan Liu, Jing Wang, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Lin Ning, Bingyi Wu, Xiaoyang Zhao, Dong Wang

Bioinform., August, 2021

cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function.

Yan Huang, Jing Wang, Yue Zhao, Huafeng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Lin Ning, Yong Zhang, Dong Wang, Yang Zhang

Nucleic Acids Res., 2021

Application of artificial intelligence and machine learning for COVID-19 drug discovery and vaccine design.

Hao Lv, Lei Shi, Joshua William Berkenpas, Fu-Ying Dao, Hasan Zulfiqar, Hui Ding, Yang Zhang, Liming Yang, Renzhi Cao

Briefings Bioinform., 2021

2020

Protein functional annotation of simultaneously improved stability, accuracy and false discovery rate achieved by a sequence-based deep learning.

Jiajun Hong, Yongchao Luo, Yang Zhang, Junbiao Ying, Weiwei Xue, Tian Xie, Lin Tao, Feng Zhu

Briefings Bioinform., 2020

Convolutional neural network-based annotation of bacterial type IV secretion system effectors with enhanced accuracy and reduced false discovery.

Jiajun Hong, Yongchao Luo, Minjie Mou, Jianbo Fu, Yang Zhang, Weiwei Xue, Tian Xie, Lin Tao, Yan Lou, Feng Zhu

Briefings Bioinform., 2020

2019

RIscoper: a tool for RNA-RNA interaction extraction from the literature.

Yang Zhang, Tianyuan Liu, Liqun Chen, Jinxurong Yang, Jiayi Yin, Yuncong Zhang, Zhixi Yun, Hao Xu, Lin Ning, Feng-Biao Guo, Yongshuai Jiang, Hao Lin, Dong Wang, Yan Huang, Jian Huang

Bioinform., 2019

2018

Therapeutic target database update 2018: enriched resource for facilitating bench-to-clinic research of targeted therapeutics.

Ying Hong Li, Chun Yan Yu, Xiao Xu Li, Peng Zhang, Jing Tang, Qingxia Yang, Tingting Fu, Xiaoyu Zhang, Xuejiao Cui, Gao Tu, Yang Zhang, Shuang Li, Fengyuan Yang, Qiu Sun, Chu Qin, Xian Zeng, Zhe Chen, Yuzong Chen, Feng Zhu

Nucleic Acids Res., 2018

2010

Viewing cancer genes from co-evolving gene modules.

Jing Zhu, Hui Xiao, Xiaopei Shen, Jing Wang, Jinfeng Zou, Lin Zhang, Da Yang, Wencai Ma, Chen Yao, Xue Gong, Min Zhang, Yang Zhang, Zheng Guo

Bioinform., 2010

2009

Identifying Candidate Cancer Genes Based on Their Somatic Mutations Co-Occurring with Cancer Genes in Cancer Genome Profiling.

Jing Zhu, Xiaopei Shen, Yang Zhang, Zheng Guo, Hui Xiao, Yunyan Gu

Proceedings of the 2nd International Conference on BioMedical Engineering and Informatics, 2009