Zhongying Zhao

According to our database, Zhongying Zhao authored at least 17 papers between 2013 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

An effective method for quantification, visualization, and analysis of 3D cell shape during early embryogenesis.

Zelin Li, Zhaoke Huang, Jianfeng Cao, Guoye Guan, Zhongying Zhao, Hong Yan

Quant. Biol., 2025

Volume Tells: Dual Cycle-Consistent Diffusion for 3D Fluorescence Microscopy De-noising and Super-Resolution.

Zelin Li, Chenwei Wang, Zhaoke Huang, Yiming Ma, Cunming Zhao, Zhongying Zhao, Hong Yan

Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2025

2024

CShaperApp: Segmenting and analyzing cellular morphologies of the developing <i>Caenorhabditis elegans</i> embryo.

Jianfeng Cao, Lihan Hu, Guoye Guan, Zelin Li, Zhongying Zhao, Chao Tang, Hong Yan

Quant. Biol., 2024

Directional And Topological Transformer With Topology Priors For 4D Cellular Image Segmentation.

Zelin Li, Zhaoke Huang, Zhen Zhu, Sicheng You, Zhongying Zhao, Hong Yan

Proceedings of the IEEE International Conference on Image Processing, 2024

2022

Computable early Caenorhabditis elegans embryo with a phase field model.

Xiangyu Kuang, Guoye Guan, Ming-Kin Wong, Lu-Yan Chan, Zhongying Zhao, Chao Tang, Lei Zhang

PLoS Comput. Biol., 2022

2019

Bayesian Detection of Abnormal Asynchrony of Division Between Sister Cells in Mutant <i>Caenorhabditis elegans</i> Embryos.

Wei Liang, Yuxiao Yang, Yusi Fang, Zhongying Zhao, Jie Hu

J. Comput. Biol., 2019

3DMMS: robust 3D Membrane Morphological Segmentation of C. elegans embryo.

Jianfeng Cao, Ming-Kin Wong, Zhongying Zhao, Hong Yan

BMC Bioinform., 2019

2018

Accurate Cell Segmentation Based on Biological Morphology Features.

Jianfeng Cao, Zhongying Zhao, Hong Yan

Proceedings of the IEEE International Conference on Systems, Man, and Cybernetics, 2018

2017

PlaMoM: a comprehensive database compiles plant mobile macromolecules.

Daogang Guan, Bin Yan, Christoph J. Thieme, Jingmin Hua, Hailong Zhu, Kenneth R. Boheler, Zhongying Zhao, Friedrich Kragler, Yiji Xia, Shoudong Zhang

Nucleic Acids Res., 2017

Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification.

Xiao-Tai Huang, Yuan Zhu, Leanne Lai-Hang Chan, Zhongying Zhao, Hong Yan

Bioinform., 2017

2016

A Probabilistic Relaxation Labeling (PRL) Based Method for C. elegans Cell Tracking in Microscopic Image Sequences.

Long Chen, Zhongying Zhao, Hong Yan

IEEE J. Sel. Top. Signal Process., 2016

2015

Gene regulatory effects inference for cell fate determination based on single-cell resolution data.

Xiao-Tai Huang, Leanne Lai Chan, Zhong-Ying Zhao, Hong Yan

Proceedings of the 2015 International Conference on Machine Learning and Cybernetics, 2015

C. elegans cell matching and tracking in a 4D imageing system.

Long Chen, Zhongying Zhao, Hong Yan

Proceedings of the 2015 IEEE International Conference on Acoustics, 2015

2014

PTHGRN: unraveling post-translational hierarchical gene regulatory networks using PPI, ChIP-seq and gene expression data.

Daogang Guan, Jiaofang Shao, Zhongying Zhao, Panwen Wang, Jing Qin, Youping Deng, Kenneth R. Boheler, Junwen Wang, Bin Yan

Nucleic Acids Res., 2014

DDGni: Dynamic delay gene-network inference from high-temporal data using gapped local alignment.

Hari Krishna Yalamanchili, Bin Yan, Mulin Jun Li, Jing Qin, Zhongying Zhao, Francis Y. L. Chin, Junwen Wang

Bioinform., 2014

CMGRN: a web server for constructing multilevel gene regulatory networks using ChIP-seq and gene expression data.

Daogang Guan, Jiaofang Shao, Youping Deng, Panwen Wang, Zhongying Zhao, Yan Liang, Junwen Wang, Bin Yan

Bioinform., 2014

2013

A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images.

Long Chen, Leanne Lai Chan, Zhongying Zhao, Hong Yan

BMC Bioinform., 2013