Andrey A. Ptitsyn

According to our database, Andrey A. Ptitsyn authored at least 16 papers between 1994 and 2015.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2015

Optimization of data-intensive next generation sequencing in high performance computing.

Nagarajan Kathiresan, Rashid Al-Ali, Puthen V. Jithesh, Tariq AbuZaid, Ramzi Temanni, Andrey A. Ptitsyn

Proceedings of the 15th IEEE International Conference on Bioinformatics and Bioengineering, 2015

2014

The ctenophore genome and the evolutionary origins of neural systems Open.

Leonid L. Moroz, Kevin M. Kocot, Mathew R. Citarella, Sohn Dosung, Tigran P. Norekian, Inna S. Povolotskaya, Anastasia P. Grigorenko, Christopher Dailey, Eugene Berezikov, Katherine M. Buckley, Andrey A. Ptitsyn, Denis A. Reshetov, Krishanu Mukherjee, Tatiana P. Moroz, Yelena Bobkova, Fahong Yu, Vladimir V. Kapitonov, Jerzy Jurka, Yuri V. Bobkov, Joshua J. Swore, David O. Girardo, Alexander Fodor, Fedor Gusev, Rachel Sanford, Rebecca Bruders, Ellen Kittler, Claudia E. Mills, Jonathan P. Rast, Romain Derelle, Victor V. Solovyev, Fyodor A. Kondrashov, Billie J. Swalla, Jonathan V. Sweedler, Evgeny I. Rogaev, Kenneth M. Halanych, Andrea B. Kohn

Nat., 2014

2012

Computational workflow for analysis of gain and loss of genes in distantly related genomes.

Andrey A. Ptitsyn, Leonid L. Moroz

BMC Bioinform., 2012

2010

Transformation of metabolism with age and lifestyle in Antarctic seals: a case study of systems biology approach to cross-species microarray experiment.

Andrey A. Ptitsyn, Amber Schlater, Shane Kanatous

BMC Syst. Biol., 2010

2009

Computational analysis of gene expression space associated with metastatic cancer.

Andrey A. Ptitsyn

BMC Bioinform., 2009

2008

Systems biology approach to identification of biomarkers for metastatic progression in cancer.

Andrey A. Ptitsyn, Michael M. Weil, Douglas H. Thamm

BMC Bioinform., 2008

Comprehensive analysis of circadian periodic pattern in plant transcriptome.

Andrey A. Ptitsyn

BMC Bioinform., 2008

2007

Digital Signal Processing Reveals Circadian Baseline Oscillation in Majority of Mammalian Genes.

Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble

PLoS Comput. Biol., 2007

Analysis of circadian pattern reveals tissue-specific alternative transcription in leptin signaling pathway.

Andrey A. Ptitsyn, Jeffrey M. Gimble

BMC Bioinform., 2007

2006

Circadian Clocks Are Resounding in Peripheral Tissues.

Andrey A. Ptitsyn, Sanjin Zvonic, Steven A. Conrad, L. Keith Scott, Randall L. Mynatt, Jeffrey M. Gimble

PLoS Comput. Biol., 2006

Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.

Jonathan D. Wren, Yuriy Gusev, Andrey A. Ptitsyn, Stephen Winters-Hilt

BMC Bioinform., 2006

Permutation test for periodicity in short time series data.

Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimble

BMC Bioinform., 2006

2005

CLU: A new algorithm for EST clustering.

Andrey A. Ptitsyn, Winston Hide

BMC Bioinform., 2005

1998

A genetic algorithm for designing gene family-specific oligonucleotide sets used for hybridization: the G protein-coupled receptor protein superfamily.

Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach

Bioinform., 1998

1995

Object-oriented data handler for sequence analysis software development.

Andrey A. Ptitsyn, Dmitry A. Grigorovich

Comput. Appl. Biosci., 1995

1994

Data bank homology search algorithm with linear computation complexity.

Victor B. Strelets, Andrey A. Ptitsyn, Luciano Milanesi, Hwa A. Lim

Comput. Appl. Biosci., 1994