Artem B. Mamonov

According to our database, Artem B. Mamonov authored at least 8 papers between 2009 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2018

Protein-ligand docking using FFT based sampling: D3R case study.

Dzmitry Padhorny, David R. Hall, Hanieh Mirzaei, Artem B. Mamonov, Mohammad Moghadasi, Andrey Alekseenko, Dmitri Beglov, Dima Kozakov

J. Comput. Aided Mol. Des., 2018

2016

Focused grid-based resampling for protein docking and mapping.

Artem B. Mamonov, Mohammad Moghadasi, Hanieh Mirzaei, Shahrooz Zarbafian, Laurie E. Grove, Tanggis Bohnuud, Pirooz Vakili, Ioannis Ch. Paschalidis, Sandor Vajda, Dima Kozakov

J. Comput. Chem., 2016

2015

The Impact of Side-Chain Packing on Protein Docking Refinement.

Mohammad Moghadasi, Hanieh Mirzaei, Artem B. Mamonov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis, Dima Kozakov

J. Chem. Inf. Model., 2015

Accounting for observed small angle X-ray scattering profile in the protein-protein docking server cluspro.

Bing Xia, Artem B. Mamonov, Seppe Leysen, Karen N. Allen, Sergei V. Strelkov, Ioannis Ch. Paschalidis, Sandor Vajda, Dima Kozakov

J. Comput. Chem., 2015

2012

A message passing approach to Side Chain Positioning with applications in protein docking refinement.

Mohammad Moghadasi, Dima Kozakov, Artem B. Mamonov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2011

Rapid sampling of all-atom peptides using a library-based polymer-growth approach.

Artem B. Mamonov, Xin Zhang, Daniel M. Zuckerman

J. Comput. Chem., 2011

Extending fragment-based free energy calculations with library monte carlo simulation: Annealing in interaction space.

Steven Lettieri, Artem B. Mamonov, Daniel M. Zuckerman

J. Comput. Chem., 2011

2009

Absolute free energies estimated by combining precalculated molecular fragment libraries.

Xin Zhang, Artem B. Mamonov, Daniel M. Zuckerman

J. Comput. Chem., 2009