Mohammad Moghadasi

According to our database, Mohammad Moghadasi authored at least 7 papers between 2012 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2018

Protein-ligand docking using FFT based sampling: D3R case study.

Dzmitry Padhorny, David R. Hall, Hanieh Mirzaei, Artem B. Mamonov, Mohammad Moghadasi, Andrey Alekseenko, Dmitri Beglov, Dima Kozakov

J. Comput. Aided Mol. Des., 2018

2016

Focused grid-based resampling for protein docking and mapping.

Artem B. Mamonov, Mohammad Moghadasi, Hanieh Mirzaei, Shahrooz Zarbafian, Laurie E. Grove, Tanggis Bohnuud, Pirooz Vakili, Ioannis Ch. Paschalidis, Sandor Vajda, Dima Kozakov

J. Comput. Chem., 2016

2015

Optimization methods for side-chain positioning and macromolecular docking

Mohammad Moghadasi

PhD thesis, 2015

The Impact of Side-Chain Packing on Protein Docking Refinement.

Mohammad Moghadasi, Hanieh Mirzaei, Artem B. Mamonov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis, Dima Kozakov

J. Chem. Inf. Model., 2015

2014

A Subspace Semi-Definite programming-based Underestimation (SSDU) method for stochastic global optimization in protein docking.

Feng Nan, Mohammad Moghadasi, Pirooz Vakili, Sandor Vajda, Dima Kozakov, Ioannis Ch. Paschalidis

Proceedings of the 53rd IEEE Conference on Decision and Control, 2014

2013

A new distributed algorithm for side-chain positioning in the process of protein docking.

Mohammad Moghadasi, Dima Kozakov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

2012

A message passing approach to Side Chain Positioning with applications in protein docking refinement.

Mohammad Moghadasi, Dima Kozakov, Artem B. Mamonov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis

Proceedings of the 51th IEEE Conference on Decision and Control, 2012