Arun Siddharth Konagurthu
According to our database1,
Arun Siddharth Konagurthu
authored at least 26 papers
between 2004 and 2023.
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Bibliography
2023
The divergence time of protein structures modelled by Markov matrices and its relation to the divergence of sequences.
CoRR, 2023
Getting 'ϕψχal' with proteins: minimum message length inference of joint distributions of backbone and sidechain dihedral angles.
Bioinform., 2023
2021
Bioinform., 2021
Proceedings of the 31st Data Compression Conference, 2021
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
2019
CoRR, 2019
Statistical compression of protein sequences and inference of marginal probability landscapes over competing alignments using finite state models and Dirichlet priors.
Bioinform., 2019
2018
2017
Statistical inference of protein structural alignments using information and compression.
Bioinform., 2017
Statistical Compression of Protein Folding Patterns for Inference of Recurrent Substructural Themes.
Proceedings of the 2017 Data Compression Conference, 2017
2015
J. Comput. Biol., 2015
2014
IEEE ACM Trans. Comput. Biol. Bioinform., 2014
A new statistical framework to assess structural alignment quality using information compression.
Bioinform., 2014
Proceedings of the 10th IEEE International Conference on e-Science, 2014
2013
Proceedings of the 2013 IEEE 13th International Conference on Data Mining, 2013
2012
Super: a web server to rapidly screen superposable oligopeptide fragments from the protein data bank.
Nucleic Acids Res., 2012
Minimum message length inference of secondary structure from protein coordinate data.
Bioinform., 2012
2011
Piecewise linear approximation of protein structures using the principle of minimum message length.
Bioinform., 2011
2010
EGM: encapsulated gene-by-gene matching to identify gene orthologs and homologous segments in genomes.
Bioinform., 2010
Proceedings of the Algorithms in Bioinformatics, 10th International Workshop, 2010
2008
BMC Syst. Biol., 2008
Structural search and retrieval using a tableau representation of protein folding patterns.
Bioinform., 2008
2006
Optimal Sum-of-Pairs Multiple Sequence Alignment Using Incremental Carrillo and Lipman Bounds.
J. Comput. Biol., 2006
2004
Progressive Multiple Alignment Using Sequence Triplet Optimizations and Three-residue Exchange Costs.
J. Bioinform. Comput. Biol., 2004