Asako Koike

According to our database1, Asako Koike authored at least 15 papers between 2004 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2019
Parallel Computation of the Burrows-Wheeler Transform of Short Reads Using Prefix Parallelism.
IEEE/ACM Trans. Comput. Biology Bioinform., 2019

2015
Ultrafast SNP analysis using the Burrows-Wheeler transform of short-read data.
Bioinformatics, 2015

2014
Genome Mapping by a 60-core Processor.
Proceedings of the BIOINFORMATICS 2014, 2014

2012
A Bit-Parallel Dynamic Programming Algorithm Suitable for DNA Sequence Alignment.
J. Bioinformatics and Computational Biology, 2012

2011
SNPInterForest: A new method for detecting epistatic interactions.
BMC Bioinformatics, 2011

Seed-Set Construction by Equi-entropy Partitioning for Efficient and Sensitive Short-Read Mapping.
Proceedings of the Algorithms in Bioinformatics - 11th International Workshop, 2011

2010
Figure classification in biomedical literature to elucidate disease mechanisms, based on pathways.
Artificial Intelligence in Medicine, 2010

2009
Computation of Rank and Select Functions on Hierarchical Binary String and Its Application to Genome Mapping Problems for Short-Read DNA Sequences.
Journal of Computational Biology, 2009

Classifying Biomedical Figures Using Combination of Bag of Keypoints and Bag of Words.
Proceedings of the 2009 International Conference on Complex, 2009

2008
Figure Classification in Biomedical Literature towards Figure Mining.
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

2007
Knowledge discovery based on an implicit and explicit conceptual network.
JASIST, 2007

2006
Improving the Performance of an SVM-Based Method for Predicting Protein-Protein Interactions.
In Silico Biology, 2006

2005
Automatic extraction of gene/protein biological functions from biomedical text.
Bioinformatics, 2005

2004
PRIME: automatically extracted PRotein Interactions and Molecular Information databas.
In Silico Biology, 2004

Prediction of Protein-Protein Interactions Using Support Vector Machines.
Proceedings of the 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 2004


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