Bartek Wilczynski

According to our database, Bartek Wilczynski authored at least 17 papers between 2006 and 2019.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2019

BPscore: An Effective Metric for Meaningful Comparisons of Structural Chromosome Segmentations.

Rafal Zaborowski, Bartek Wilczynski

J. Comput. Biol., 2019

2017

FastBill: An Improved Tool for Prediction of Cis-Regulatory Modules.

Bartek Wilczynski, Jerzy Tiuryn

J. Comput. Biol., 2017

2015

Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data.

Michal Dabrowski, Norbert Dojer, Izabella Krystkowiak, Bozena Kaminska, Bartek Wilczynski

BMC Bioinform., 2015

2014

Supervised learning method for predicting chromatin boundary associated insulator elements.

Pawel Bednarz, Bartek Wilczynski

J. Bioinform. Comput. Biol., 2014

Fast Parallel Bayesian Networks Reconstruction with BNFinder.

Alina Frolova, Bartek Wilczynski

Proceedings of the International Work-Conference on Bioinformatics and Biomedical Engineering, 2014

2013

Active enhancer positions can be accurately predicted from chromatin marks and collective sequence motif data.

Agnieszka Podsiadlo, Mariusz Wrzesien, Wieslaw Paja, Witold R. Rudnicki, Bartek Wilczynski

BMC Syst. Biol., 2013

BNFinder2: Faster Bayesian network learning and Bayesian classification.

Norbert Dojer, Pawel Bednarz, Agnieszka Podsiadlo, Bartek Wilczynski

Bioinform., 2013

2012

Predicting Spatial and Temporal Gene Expression Using an Integrative Model of Transcription Factor Occupancy and Chromatin State.

Bartek Wilczynski, Ya-Hsin Liu, Zhen Xuan Yeo, Eileen E. M. Furlong

PLoS Comput. Biol., 2012

Modeling Cell Populations in Development using Individual Stochastic Regulatory Networks.

Pawel Bednarz, Bartek Wilczynski

Proceedings of the SIMULTECH 2012 - Proceedings of the 2nd International Conference on Simulation and Modeling Methodologies, Technologies and Applications, Rome, Italy, 28, 2012

2010

A Computer Scientist's Guide to the Regulatory Genome.

Bartek Wilczynski, Torgeir R. Hvidsten

Fundam. Informaticae, 2010

2009

Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs.

Bartek Wilczynski, Norbert Dojer, Mateusz Patelak, Jerzy Tiuryn

BMC Bioinform., 2009

BNFinder: exact and efficient method for learning Bayesian networks.

Bartek Wilczynski, Norbert Dojer

Bioinform., 2009

Biopython: freely available Python tools for computational molecular biology and bioinformatics.

Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon

Bioinform., 2009

2007

Reconstruction of Mammalian Cell Cycle Regulatory Network from Microarray Data Using Stochastic Logical Networks.

Bartek Wilczynski, Jerzy Tiuryn

Proceedings of the Computational Methods in Systems Biology, International Conference, 2007

2006

Using local gene expression similarities to discover regulatory binding site modules.

Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kryshtafovych, Jerzy Tiuryn, Henryk Jan Komorowski, Krzysztof Fidelis

BMC Bioinform., 2006

Applying dynamic Bayesian networks to perturbed gene expression data.

Norbert Dojer, Anna Gambin, Andrzej Mizera, Bartek Wilczynski, Jerzy Tiuryn

BMC Bioinform., 2006

Regulatory Network Reconstruction Using Stochastic Logical Networks.

Bartek Wilczynski, Jerzy Tiuryn

Proceedings of the Computational Methods in Systems Biology, International Conference, 2006