Michiel J. L. de Hoon

According to our database1, Michiel J. L. de Hoon authored at least 17 papers between 2002 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Book 
In proceedings 
Article 
PhD thesis 
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Links

On csauthors.net:

Bibliography

2019
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases.
Nucleic Acids Research, 2019

2017
Genome-scale regression analysis reveals a linear relationship for promoters and enhancers after combinatorial drug treatment.
Bioinformatics, 2017

2016
On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase.
Database, 2016

2014
A promoter-level mammalian expression atlas.
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Nature, 2014

2011
Optimization of turn-back primers in isothermal amplification.
Proceedings of the 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2011

2009
Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite.
Bioinformatics, 2009

Biopython: freely available Python tools for computational molecular biology and bioinformatics.
Bioinformatics, 2009

2008
DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information.
Nucleic Acids Research, 2008

2007
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes.
BMC Bioinformatics, 2007

2005
Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species.
PLoS Computational Biology, 2005

Comparative Systems Biology of the Sporulation Initiation Network in Prokaryotes.
Proceedings of the Systems Biology and Regulatory Genomics, 2005

Bayesian Joint Prediction of Associated Transcription Factors in Bacillus subtilis.
Proceedings of the Biocomputing 2005, 2005

2004
Predicting the Operon Structure of Bacillus subtilis Using Operon Length, Intergene Distance, and Gene Expression Information.
Proceedings of the Biocomputing 2004, 2004

Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

2003
Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data of Bacillus Subtilis Using Differential Equations.
Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

2002
Statistical analysis of a small set of time-ordered gene expression data using linear splines.
Bioinformatics, 2002

Inferring Gene Regulatory Networks from Time-Ordered Gene Expression Data Using Differential Equations.
Proceedings of the Discovery Science, 5th International Conference, 2002


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