Brad A. Chapman

According to our database, Brad A. Chapman authored at least 18 papers between 2004 and 2018.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2018

The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018).

Nomi L. Harris, Heather Wiencko, Brad Chapman, Peter J. A. Cock, Karsten Hokamp, Hilmar Lapp, Christopher J. Fields, Bastian Greshake Tzovaras

F1000Research, 2018

The 2^nd Workshop on Hacking and Making at Time-Bounded Events: Current Trends and Next Steps in Research and Event Design.

Ei Pa Pa Pe-Than, James D. Herbsleb, Alexander Nolte, Elizabeth Gerber, Brittany Fiore-Gartland, Brad Chapman, Aurelia Moser, Nancy Wilkins-Diehr

Proceedings of the Extended Abstracts of the 2018 CHI Conference on Human Factors in Computing Systems, 2018

2017

bcbioRNASeq: R package for bcbio RNA-seq analysis.

Michael J. Steinbaugh, Lorena Pantano, Rory D. Kirchner, Víctor Barrera, Brad A. Chapman, Mary E. Piper, Meeta Mistry, Radhika S. Khetani, Kayleigh Rutherford, Oliver Hofmann, John N. Hutchinson, Shannan J. Ho Sui

F1000Research, 2017

The 2017 Bioinformatics Open Source Conference (BOSC).

Nomi L. Harris, Peter J. A. Cock, Brad Chapman, Christopher J. Fields, Karsten Hokamp, Hilmar Lapp, Monica C. Munoz-Torres, Bastian Greshake Tzovaras, Heather Wiencko

F1000Research, 2017

Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis.

Steffen Möller, Stuart W. Prescott, Lars Wirzenius, Petter Reinholdtsen, Brad Chapman, Pjotr Prins, Stian Soiland-Reyes, Fabian Klötzl, Andrea Bagnacani, Matús Kalas, Andreas Tille, Michael R. Crusoe

Data Sci. Eng., 2017

Hacking and Making at Time-Bounded Events: Current Trends and Next Steps in Research and Event Design.

Anna Filippova, Brad Chapman, R. Stuart Geiger, James D. Herbsleb, Arun Kalyanasundaram, Erik H. Trainer, Aurelia Moser, Arlin Stoltzfus

Proceedings of the 2017 ACM Conference on Computer Supported Cooperative Work and Social Computing, 2017

2016

The 2015 Bioinformatics Open Source Conference (BOSC 2015).

Nomi L. Harris, Peter J. A. Cock, Hilmar Lapp, Brad Chapman, Rob Davey, Christopher J. Fields, Karsten Hokamp, Monica C. Munoz-Torres

PLoS Comput. Biol., 2016

The 2016 Bioinformatics Open Source Conference (BOSC).

Nomi L. Harris, Peter J. A. Cock, Brad Chapman, Christopher J. Fields, Karsten Hokamp, Hilmar Lapp, Monica C. Munoz-Torres, Heather Wiencko

F1000Research, 2016

2015

The Bioinformatics Open Source Conference (BOSC) 2013.

Nomi L. Harris, Peter J. A. Cock, Brad A. Chapman, Jeremy Goecks, Hans-Rudolf Hotz, Hilmar Lapp

Bioinform., 2015

2014

Community-driven development for computational biology at Sprints, Hackathons and Codefests.

Steffen Möller, Enis Afgan, Michael Banck, Raoul Jean Pierre Bonnal, Timothy Booth, John Chilton, Peter J. A. Cock, Markus Gumbel, Nomi L. Harris, Richard C. G. Holland, Matús Kalas, László Kaján, Eri Kibukawa, David R. Powell, Pjotr Prins, Jacqueline Quinn, Olivier Sallou, Francesco Strozzi, Torsten Seemann, Clare Sloggett, Stian Soiland-Reyes, William Spooner, Sascha Steinbiss, Andreas Tille, Anthony J. Travis, Roman Guimera, Toshiaki Katayama, Brad A. Chapman

BMC Bioinform., 2014

2013

GEMINI: Integrative Exploration of Genetic Variation and Genome Annotations.

Umadevi Paila, Brad A. Chapman, Rory D. Kirchner, Aaron R. Quinlan

PLoS Comput. Biol., 2013

2012

The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons.

Shannan J. Ho Sui, Kimberly Begley, Dorothy Reilly, Brad Chapman, Ray McGovern, Philippe Rocca-Serra, Eamonn Maguire, Gabriel M. Altschuler, Terah A. A. Hansen, Ramakrishna Sompallae, Andrei Krivtsov, Ramesh A. Shivdasani, Scott A. Armstrong, Aedín C. Culhane, Mick Correll, Susanna-Assunta Sansone, Oliver Hofmann, Winston Hide

Nucleic Acids Res., 2012

Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython.

Eric Talevich, Brandon M. Invergo, Peter J. A. Cock, Brad A. Chapman

BMC Bioinform., 2012

Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community.

Konstantinos Krampis, Tim Booth, Brad Chapman, Bela Tiwari, Mesude Bicak, Dawn Field, Karen E. Nelson

BMC Bioinform., 2012

CloudMan as a platform for tool, data, and analysis distribution.

Enis Afgan, Brad Chapman, James Taylor

BMC Bioinform., 2012

2010

Galaxy CloudMan: delivering cloud compute clusters.

Enis Afgan, Dannon Baker, Nathan Coraor, Brad Chapman, Anton Nekrutenko, James Taylor

BMC Bioinform., 2010

2009

Biopython: freely available Python tools for computational molecular biology and bioinformatics.

Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon

Bioinform., 2009

2004

A comparative phylogenetic approach for dating whole genome duplication events.

Brad A. Chapman, John E. Bowers, Stefan R. Schulze, Andrew H. Paterson

Bioinform., 2004