Bülent Arman Aksoy

According to our database, Bülent Arman Aksoy authored at least 9 papers between 2013 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

Pathway Commons 2019 Update: integration, analysis and exploration of pathway data.

Igor V. Rodchenkov, Ozgun Babur, Augustin Luna, Bülent Arman Aksoy, Jeffrey V. Wong, Dylan Fong, Max Franz, Metin Can Siper, Manfred Cheung, Michael Wrana, Harsh Mistry, Logan Mosier, Jonah Dlin, Qizhi Wen, Caitlin O'Callaghan, Wanxin Li, Geoffrey Elder, Peter T. Smith, Christian Dallago, Ethan Cerami, Benjamin Gross, Ugur Dogrusoz, Emek Demir, Gary D. Bader, Chris Sander

Nucleic Acids Res., 2020

2019

Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging.

Eric Czech, Bülent Arman Aksoy, Pinar Aksoy, Jeff Hammerbacher

BMC Bioinform., 2019

2017

CTD2 Dashboard: a searchable web interface to connect validated results from the Cancer Target Discovery and Development Network.

Bülent Arman Aksoy, Vlado Dancík, Kenneth Smith, Jessica N. Mazerik, Zhou Ji, Benjamin E. Gross, Olga Nikolova, Nadia Jaber, Andrea Califano, Stuart L. Schreiber, Daniela S. Gerhard, Leandro Hermida, Subhashini Jagu, Chris Sander, Aris Floratos, Paul A. Clemons

Database J. Biol. Databases Curation, 2017

2016

pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data.

Dan Vanderkam, Bülent Arman Aksoy, Isaac Hodes, Jaclyn Perrone, Jeff Hammerbacher

Bioinform., 2016

PaxtoolsR: pathway analysis in R using Pathway Commons.

Augustin Luna, Özgün Babur, Bülent Arman Aksoy, Emek Demir, Chris Sander

Bioinform., 2016

2014

Pattern search in BioPAX models.

Özgün Babur, Bülent Arman Aksoy, Igor V. Rodchenkov, Selçuk Onur Sümer, Chris Sander, Emek Demir

Bioinform., 2014

Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles.

Bülent Arman Aksoy, Emek Demir, Özgün Babur, Weiqing Wang, Xiaohong Jing, Nikolaus Schultz, Chris Sander

Bioinform., 2014

2013

Using Biological Pathway Data with Paxtools.

Emek Demir, Özgün Babur, Igor V. Rodchenkov, Bülent Arman Aksoy, Ken I. Fukuda, Benjamin E. Gross, Selçuk Onur Sümer, Gary D. Bader, Chris Sander

PLoS Comput. Biol., 2013

PiHelper: an open source framework for drug-target and antibody-target data.

Bülent Arman Aksoy, Jianjiong Gao, Gideon Dresdner, Weiqing Wang, Alex Root, Xiaohong Jing, Ethan G. Cerami, Chris Sander

Bioinform., 2013