Cesim Erten

According to our database, Cesim Erten authored at least 34 papers between 2002 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions.

Ibrahim Berber, Cesim Erten, Hilal Kazan

IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022

PersonaDrive: a method for the identification and prioritization of personalized cancer drivers.

Cesim Erten, Aissa Houdjedj, Hilal Kazan, Ahmed Amine Taleb Bahmed

Bioinform., 2022

2021

Ranking cancer drivers via betweenness-based outlier detection and random walks.

Cesim Erten, Aissa Houdjedj, Hilal Kazan

BMC Bioinform., 2021

2020

MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules.

Rafsan Ahmed, Ilyes Baali, Cesim Erten, Evis Hoxha, Hilal Kazan

Bioinform., 2020

2019

Structure of conflict graphs in constraint alignment problems and algorithms.

Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten

Discret. Math. Theor. Comput. Sci., 2019

2017

RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.

Ferhat Alkan, Cesim Erten

Bioinform., 2017

2015

SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.

Ferhat Alkan, Cesim Erten

Bioinform., 2015

2014

Constrained Alignments of a Pair of Graphs.

Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten

CoRR, 2014

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks.

Ferhat Alkan, Cesim Erten

Bioinform., 2014

2013

SPINAL: scalable protein interaction network alignment.

Ahmet Emre Aladag, Cesim Erten

Bioinform., 2013

CAMPways: constrained alignment framework for the comparative analysis of a pair of metabolic pathways.

Gamze Abaka, Türker Bíyíkoglu, Cesim Erten

Bioinform., 2013

2011

Reliability-Oriented bioinformatic networks visualization.

Ahmet Emre Aladag, Cesim Erten, Melih Sözdinler

Bioinform., 2011

Colored Simultaneous Geometric Embeddings and Universal Pointsets.

Ulrik Brandes, Cesim Erten, Alejandro Estrella-Balderrama, J. Joseph Fowler, Fabrizio Frati, Markus Geyer, Carsten Gutwenger, Seok-Hee Hong, Michael Kaufmann, Stephen G. Kobourov, Giuseppe Liotta, Petra Mutzel, Antonios Symvonis

Algorithmica, 2011

2010

Force-directed approaches to sensor localization.

Alon Efrat, David Forrester, Anand Iyer, Stephen G. Kobourov, Cesim Erten, Ozan Kilic

ACM Trans. Sens. Networks, 2010

Fully Decentralized and Collaborative Multilateration Primitives for Uniquely Localizing WSNs.

Arda Cakiroglu, Cesim Erten

EURASIP J. Wirel. Commun. Netw., 2010

Improving performances of suboptimal greedy iterative biclustering heuristics via localization.

Cesim Erten, Melih Sözdinler

Bioinform., 2010

2009

Crossing minimization in weighted bipartite graphs.

Olca A. Çakiroglu, Cesim Erten, Ömer Karatas, Melih Sözdinler

J. Discrete Algorithms, 2009

Fully Decentralized, Collaborative Multilateration Primitives for Uniquely Localizing WSNs.

Arda Cakiroglu, Cesim Erten

Proceedings of the Wireless Algorithms, 2009

A robust localization framework to handle noisy measurements in wireless sensor networks.

Cesim Erten, Ömer Karatas

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

Biclustering Expression Data Based on Expanding Localized Substructures.

Cesim Erten, Melih Sözdinler

Proceedings of the Bioinformatics and Computational Biology, 2009

2008

A Robust Biclustering Method Based on Crossing Minimization in Bipartite Graphs.

Cesim Erten, Melih Sözdinler

Proceedings of the Graph Drawing, 16th International Symposium, 2008

2007

Fixed-Location Circular Arc Drawing of Planar Graphs.

Alon Efrat, Cesim Erten, Stephen G. Kobourov

J. Graph Algorithms Appl., 2007

On simultaneous planar graph embeddings.

Peter Braß, Eowyn Cenek, Christian A. Duncan, Alon Efrat, Cesim Erten, Dan Ismailescu, Stephen G. Kobourov, Anna Lubiw, Joseph S. B. Mitchell

Comput. Geom., 2007

Colored Simultaneous Geometric Embeddings.

Ulrik Brandes, Cesim Erten, J. Joseph Fowler, Fabrizio Frati, Markus Geyer, Carsten Gutwenger, Seok-Hee Hong, Michael Kaufmann, Stephen G. Kobourov, Giuseppe Liotta, Petra Mutzel, Antonios Symvonis

Proceedings of the Computing and Combinatorics, 13th Annual International Conference, 2007

2006

GSPIM: graphical visualization tool for MIPS assembly programming and simulation.

Patrick Borunda, Chris Brewer, Cesim Erten

Proceedings of the 37th SIGCSE Technical Symposium on Computer Science Education, 2006

Force-Directed Approaches to Sensor Localization.

Alon Efrat, David Forrester, Anand Iyer, Stephen G. Kobourov, Cesim Erten

Proceedings of the Eighth Workshop on Algorithm Engineering and Experiments, 2006

2005

Simultaneous Embedding of a Planar Graph and Its Dual on the Grid.

Cesim Erten, Stephen G. Kobourov

Theory Comput. Syst., 2005

Simultaneous Graph Drawing: Layout Algorithms and Visualization Schemes.

Cesim Erten, Stephen G. Kobourov, Vu Le, Armand Navabi

J. Graph Algorithms Appl., 2005

Simultaneous Embedding of Planar Graphs with Few Bends.

Cesim Erten, Stephen G. Kobourov

J. Graph Algorithms Appl., 2005

2004

Exploring the computing literature using temporal graph visualization.

Cesim Erten, Philip J. Harding, Stephen G. Kobourov, Kevin Wampler, Gary V. Yee

Proceedings of the Visualization and Data Analysis 2004, 2004

Morphing planar graphs.

Cesim Erten, Stephen G. Kobourov, Chandan Pitta

Proceedings of the 20th ACM Symposium on Computational Geometry, 2004

2003

Intersection-Free Morphing of Planar Graphs.

Cesim Erten, Stephen G. Kobourov, Chandan Pitta

Proceedings of the Graph Drawing, 11th International Symposium, 2003

GraphAEL: Graph Animations with Evolving Layouts.

Cesim Erten, Philip J. Harding, Stephen G. Kobourov, Kevin Wampler, Gary V. Yee

Proceedings of the Graph Drawing, 11th International Symposium, 2003

2002

On Simultaneous Graph Embedding

Christian A. Duncan, Alon Efrat, Cesim Erten, Stephen G. Kobourov, Joseph S. B. Mitchell

CoRR, 2002