Cesim Erten

Orcid: 0000-0002-8149-7113

According to our database1, Cesim Erten authored at least 35 papers between 2002 and 2024.

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Bibliography

2024
Size Should not Matter: Scale-invariant Stress Metrics.
CoRR, 2024

2023
Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

2022
PersonaDrive: a method for the identification and prioritization of personalized cancer drivers.
Bioinform., 2022

2021
Ranking cancer drivers via betweenness-based outlier detection and random walks.
BMC Bioinform., 2021

2020
MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules.
Bioinform., 2020

2019
Structure of conflict graphs in constraint alignment problems and algorithms.
Discret. Math. Theor. Comput. Sci., 2019

2017
RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.
Bioinform., 2017

2015
SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
Bioinform., 2015

2014
Constrained Alignments of a Pair of Graphs.
CoRR, 2014

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks.
Bioinform., 2014

2013
SPINAL: scalable protein interaction network alignment.
Bioinform., 2013

CAMPways: constrained alignment framework for the comparative analysis of a pair of metabolic pathways.
Bioinform., 2013

2011
Reliability-Oriented bioinformatic networks visualization.
Bioinform., 2011

Colored Simultaneous Geometric Embeddings and Universal Pointsets.
Algorithmica, 2011

2010
Force-directed approaches to sensor localization.
ACM Trans. Sens. Networks, 2010

Fully Decentralized and Collaborative Multilateration Primitives for Uniquely Localizing WSNs.
EURASIP J. Wirel. Commun. Netw., 2010

Improving performances of suboptimal greedy iterative biclustering heuristics via localization.
Bioinform., 2010

2009
Crossing minimization in weighted bipartite graphs.
J. Discrete Algorithms, 2009

Fully Decentralized, Collaborative Multilateration Primitives for Uniquely Localizing WSNs.
Proceedings of the Wireless Algorithms, 2009

A robust localization framework to handle noisy measurements in wireless sensor networks.
Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

Biclustering Expression Data Based on Expanding Localized Substructures.
Proceedings of the Bioinformatics and Computational Biology, 2009

2008
A Robust Biclustering Method Based on Crossing Minimization in Bipartite Graphs.
Proceedings of the Graph Drawing, 16th International Symposium, 2008

2007
Fixed-Location Circular Arc Drawing of Planar Graphs.
J. Graph Algorithms Appl., 2007

On simultaneous planar graph embeddings.
Comput. Geom., 2007

Colored Simultaneous Geometric Embeddings.
Proceedings of the Computing and Combinatorics, 13th Annual International Conference, 2007

2006
GSPIM: graphical visualization tool for MIPS assembly programming and simulation.
Proceedings of the 37th SIGCSE Technical Symposium on Computer Science Education, 2006

Force-Directed Approaches to Sensor Localization.
Proceedings of the Eighth Workshop on Algorithm Engineering and Experiments, 2006

2005
Simultaneous Embedding of a Planar Graph and Its Dual on the Grid.
Theory Comput. Syst., 2005

Simultaneous Graph Drawing: Layout Algorithms and Visualization Schemes.
J. Graph Algorithms Appl., 2005

Simultaneous Embedding of Planar Graphs with Few Bends.
J. Graph Algorithms Appl., 2005

2004
Exploring the computing literature using temporal graph visualization.
Proceedings of the Visualization and Data Analysis 2004, 2004

Morphing planar graphs.
Proceedings of the 20th ACM Symposium on Computational Geometry, 2004

2003
Intersection-Free Morphing of Planar Graphs.
Proceedings of the Graph Drawing, 11th International Symposium, 2003

GraphAEL: Graph Animations with Evolving Layouts.
Proceedings of the Graph Drawing, 11th International Symposium, 2003

2002
On Simultaneous Graph Embedding
CoRR, 2002


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