Ferhat Alkan

According to our database, Ferhat Alkan authored at least 7 papers between 2014 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

Ribo-ODDR: oligo design pipeline for experiment-specific rRNA depletion in Ribo-seq.

Ferhat Alkan, Joana Silva, Eric Pintó Barberà, William J. Faller

Bioinform., 2021

2019

Structure of conflict graphs in constraint alignment problems and algorithms.

Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten

Discret. Math. Theor. Comput. Sci., 2019

2017

RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications.

Ferhat Alkan, Cesim Erten

Bioinform., 2017

RAIN: RNA-protein Association and Interaction Networks.

Alexander Junge, Jan C. Refsgaard, Christian Garde, Xiaoyong Pan, Alberto Santos, Ferhat Alkan, Christian Anthon, Christian von Mering, Christopher T. Workman, Lars Juhl Jensen, Jan Gorodkin

Database J. Biol. Databases Curation, 2017

2015

SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.

Ferhat Alkan, Cesim Erten

Bioinform., 2015

2014

Constrained Alignments of a Pair of Graphs.

Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten

CoRR, 2014

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks.

Ferhat Alkan, Cesim Erten

Bioinform., 2014