Charles Christoffer

According to our database, Charles Christoffer authored at least 14 papers between 2015 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

SHREC 2022: Protein-ligand binding site recognition.

Luca Gagliardi, Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Hao Huang, Boulbaba Ben Amor, Yi Fang, Yuanyuan Zhang, Xiao Wang, Charles Christoffer, Daisuke Kihara, Apostolos Axenopoulos, Stelios K. Mylonas, Petros Daras

Comput. Graph., 2022

2021

LZerD webserver for pairwise and multiple protein-protein docking.

Charles Christoffer, Siyang Chen, Vijay Bharadwaj, Tunde Aderinwale, Vidhur Kumar, Matin Hormati, Daisuke Kihara

Nucleic Acids Res., 2021

SHREC 2021: Retrieval and classification of protein surfaces equipped with physical and chemical properties.

Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Yonghuai Liu, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Evangelia I. Zacharaki, Eleftheria Psatha, Dimitrios Laskos, Gerasimos Arvanitis, Konstantinos Moustakas, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Daisuke Kihara, Andrea Giachetti, Huu-Nghia Nguyen, Tuan-Duy Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le-Thanh, Hai-Dang Nguyen, Minh-Triet Tran

Comput. Graph., 2021

SHREC 2021: Surface-based Protein Domains Retrieval.

Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès

Proceedings of the 14th Eurographics Workshop on 3D Object Retrieval, 2021

2020

Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes.

Genki Terashi, Charles Christoffer, Daisuke Kihara

Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020

SHREC 2020: Multi-domain protein shape retrieval challenge.

Florent Langenfeld, Yuxu Peng, Yu-Kun Lai, Paul L. Rosin, Tunde Aderinwale, Genki Terashi, Charles Christoffer, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Andrea Giachetti, Stelios K. Mylonas, Apostolos Axenopoulos, Petros Daras, Ekpo Otu, Matthieu Montès

Comput. Graph., 2020

Protein docking model evaluation by 3D deep convolutional neural networks.

Xiao Wang, Genki Terashi, Charles Christoffer, Mengmeng Zhu, Daisuke Kihara

Bioinform., 2020

2019

Study of the Variability of the Native Protein Structure.

Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

A global map of the protein shape universe.

Xusi Han, Atilla Sit, Charles Christoffer, Siyang Chen, Daisuke Kihara

PLoS Comput. Biol., 2019

2018

Modeling the assembly order of multimeric heteroprotein complexes.

Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara

PLoS Comput. Biol., 2018

2017

Modeling disordered protein interactions from biophysical principles.

Lenna X. Peterson, Amitava Roy, Charles Christoffer, Genki Terashi, Daisuke Kihara

PLoS Comput. Biol., 2017

Protein Shape Retrieval.

Na Song, Daniela Craciun, Charles Christoffer, Xusi Han, Daisuke Kihara, Guillaume Levieux, Matthieu Montès, Hong Qin, Pranjal Sahu, Genki Terashi, Haiguang Liu

Proceedings of the 10th Eurographics Workshop on 3D Object Retrieval, 2017

2016

PL-PatchSurfer2: Improved Local Surface Matching-Based Virtual Screening Method That Is Tolerant to Target and Ligand Structure Variation.

Woong-Hee Shin, Charles Christoffer, Ji-Bo Wang, Daisuke Kihara

J. Chem. Inf. Model., 2016

2015

Navigating 3D electron microscopy maps with EM-SURFER.

Juan Esquivel-Rodríguez, Yi Xiong, Xusi Han, Shuomeng Guang, Charles Christoffer, Daisuke Kihara

BMC Bioinform., 2015