Genki Terashi

According to our database, Genki Terashi authored at least 15 papers between 2012 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Enhancing cryo-EM maps with 3D deep generative networks for assisting protein structure modeling.

Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Daisuke Kihara

Bioinform., August, 2023

2021

Efficient Flexible Fitting Refinement with Automatic Error Fixing for De Novo Structure Modeling from Cryo-EM Density Maps.

Takaharu Mori, Genki Terashi, Daisuke Matsuoka, Daisuke Kihara, Yuji Sugita

J. Chem. Inf. Model., 2021

Protein contact map refinement for improving structure prediction using generative adversarial networks.

Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Aashish Jain, Yuki Kagaya, Daisuke Kihara

Bioinform., 2021

SHREC 2021: Surface-based Protein Domains Retrieval.

Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès

Proceedings of the 14th Eurographics Workshop on 3D Object Retrieval, 2021

2020

Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes.

Genki Terashi, Charles Christoffer, Daisuke Kihara

Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020

MAINMASTseg: Automated Map Segmentation Method for Cryo-EM Density Maps with Symmetry.

Genki Terashi, Yuki Kagaya, Daisuke Kihara

J. Chem. Inf. Model., 2020

SHREC 2020: Multi-domain protein shape retrieval challenge.

Florent Langenfeld, Yuxu Peng, Yu-Kun Lai, Paul L. Rosin, Tunde Aderinwale, Genki Terashi, Charles Christoffer, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Andrea Giachetti, Stelios K. Mylonas, Apostolos Axenopoulos, Petros Daras, Ekpo Otu, Matthieu Montès

Comput. Graph., 2020

Protein docking model evaluation by 3D deep convolutional neural networks.

Xiao Wang, Genki Terashi, Charles Christoffer, Mengmeng Zhu, Daisuke Kihara

Bioinform., 2020

2019

Study of the Variability of the Native Protein Structure.

Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 3, 2019

Protein Shape Retrieval Contest.

Florent Langenfeld, Apostolos Axenopoulos, Halim Benhabiles, Petros Daras, Andrea Giachetti, Xusi Han, Karim Hammoudi, Daisuke Kihara, Tuan Manh Lai, Haiguang Liu, Mahmoud Melkemi, Stelios K. Mylonas, Genki Terashi, Yufan Wang, Féryal Windal, Matthieu Montès

Proceedings of the 12th Eurographics Workshop on 3D Object Retrieval, 2019

Classification in Cryo-Electron Tomograms.

Ilja Gubins, Gijs van der Schot, Remco C. Veltkamp, Friedrich Förster, Xuefeng Du, Xiangrui Zeng, Zhenxi Zhu, Lufan Chang, Min Xu, Emmanuel Moebel, Antonio Martínez-Sánchez, Charles Kervrann, Tuan Manh Lai, Xusi Han, Genki Terashi, Daisuke Kihara, Benjamin A. Himes, Xiaohua Wan, Jingrong Zhang, Shan Gao, Yu Hao, Zhilong Lv, Xiaohua Wan, Zhidong Yang, Zijun Ding, Xuefeng Cui, Fa Zhang

Proceedings of the 12th Eurographics Workshop on 3D Object Retrieval, 2019

2018

Modeling the assembly order of multimeric heteroprotein complexes.

Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara

PLoS Comput. Biol., 2018

2017

Modeling disordered protein interactions from biophysical principles.

Lenna X. Peterson, Amitava Roy, Charles Christoffer, Genki Terashi, Daisuke Kihara

PLoS Comput. Biol., 2017

Protein Shape Retrieval.

Na Song, Daniela Craciun, Charles Christoffer, Xusi Han, Daisuke Kihara, Guillaume Levieux, Matthieu Montès, Hong Qin, Pranjal Sahu, Genki Terashi, Haiguang Liu

Proceedings of the 10th Eurographics Workshop on 3D Object Retrieval, 2017

2012

LB3D: A Protein Three-Dimensional Substructure Search Program Based on the Lower Bound of a Root Mean Square Deviation Value.

Genki Terashi, Tetsuo Shibuya, Mayuko Takeda-Shitaka

J. Comput. Biol., 2012