Christopher A. Maher

According to our database, Christopher A. Maher authored at least 6 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

PACT: a pipeline for analysis of circulating tumor DNA.

Jace Webster, Ha X. Dang, Pradeep S. Chauhan, Wenjia Feng, Alex Shiang, Peter K. Harris, Russell K. Pachynski, Aadel A Chaudhuri, Christopher A. Maher

Bioinform., August, 2023

2017

INTEGRATE-neo: a pipeline for personalized gene fusion neoantigen discovery.

Jin Zhang, Elaine R. Mardis, Christopher A. Maher

Bioinform., 2017

2015

Genome Modeling System: A Knowledge Management Platform for Genomics.

Malachi Griffith, Obi L. Griffith, Scott M. Smith, Avinash Ramu, Matthew B. Callaway, Anthony M. Brummett, Michael J. Kiwala, Adam C. Coffman, Allison A. Regier, Benjamin J. Oberkfell, Gabriel E. Sanderson, Thomas P. Mooney, Nathaniel G. Nutter, Edward A. Belter, Feiyu Du, Robert L. Long, Travis E. Abbott, Ian T. Ferguson, David L. Morton, Mark M. Burnett, James V. Weible, Joshua B. Peck, Adam Dukes, Joshua F. McMichael, Justin T. Lolofie, Brian R. Derickson, Jasreet Hundal, Zachary L. Skidmore, Benjamin J. Ainscough, Nathan D. Dees, William S. Schierding, Cyriac Kandoth, Kyung H. Kim, Charles Lu, Christopher C. Harris, Nicole Maher, Christopher A. Maher, Vincent J. Magrini, Benjamin S. Abbott, Ken Chen, Eric Clark, Indraniel Das, Xian Fan, Amy E. Hawkins, Todd G. Hepler, Todd N. Wylie, Shawn M. Leonard, William E. Schroeder, Xiaoqi Shi, Lynn K. Carmichael, Matthew R. Weil, Richard W. Wohlstadter, Gary Stiehr, Michael D. McLellan, Craig S. Pohl, Christopher A. Miller, Daniel C. Koboldt, Jason R. Walker, James M. Eldred, David E. Larson, David J. Dooling, Li Ding, Elaine R. Mardis, Richard K. Wilson

PLoS Comput. Biol., 2015

2011

ChimeraScan: a tool for identifying chimeric transcription in sequencing data.

Matthew K. Iyer, Arul M. Chinnaiyan, Christopher A. Maher

Bioinform., 2011

2010

HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data.

Zhaohui S. Qin, Jianjun Yu, Jincheng Shen, Christopher A. Maher, Ming Hu, Shanker Kalyana-Sundaram, Jindan Yu, Arul M. Chinnaiyan

BMC Bioinform., 2010

2009

ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches.

You Jung Kim, Nikhil Teletia, Victor Ruotti, Christopher A. Maher, Arul M. Chinnaiyan, Ron M. Stewart, James A. Thomson, Jignesh M. Patel

Bioinform., 2009