Obi L. Griffith

Orcid: 0000-0002-0843-4271

According to our database1, Obi L. Griffith authored at least 21 papers between 2005 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of two.

Timeline

Legend:

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In proceedings 
Article 
PhD thesis 
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Links

Online presence:

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Bibliography

2024
GAiN: An integrative tool utilizing generative adversarial neural networks for augmented gene expression analysis.
Patterns, 2024

2023
CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase.
Nucleic Acids Res., January, 2023

2022
Bam-readcount - rapid generation of basepair-resolution sequence metrics.
J. Open Source Softw., 2022

2021
Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts.
Nucleic Acids Res., 2021

2018
ClinGen Cancer Somatic Working Group - Standardizing and democratizing access to cancer molecular diagnostic data to drive translational research.
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018

2016
DGIdb 2.0: mining clinically relevant drug-gene interactions.
Nucleic Acids Res., 2016

ORegAnno 3.0: a community-driven resource for curated regulatory annotation.
Nucleic Acids Res., 2016

GenVisR: Genomic Visualizations in R.
Bioinform., 2016

2015
Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud.
PLoS Comput. Biol., 2015

Genome Modeling System: A Knowledge Management Platform for Genomics.
PLoS Comput. Biol., 2015

Statistically identifying tumor suppressors and oncogenes from pan-cancer genome-sequencing data.
Bioinform., 2015

2014
SciClone: Inferring Clonal Architecture and Tracking the Spatial and Temporal Patterns of Tumor Evolution.
PLoS Comput. Biol., 2014

2012
On the Deep Order-Preserving Submatrix Problem: A Best Effort Approach.
IEEE Trans. Knowl. Data Eng., 2012

2010
Genomic analysis of a rare human tumor.
BMC Bioinform., 2010

2009
KiWi: A Scalable Subspace Clustering Algorithm for Gene Expression Analysis
CoRR, 2009

2008
ORegAnno: an open-access community-driven resource for regulatory annotation.
Nucleic Acids Res., 2008

2007
A Survey of Genomic Properties for the Detection of Regulatory Polymorphisms.
PLoS Comput. Biol., 2007

2006
cisRED: a database system for genome-scale computational discovery of regulatory elements.
Nucleic Acids Res., 2006

ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation.
Bioinform., 2006

Discovering significant OPSM subspace clusters in massive gene expression data.
Proceedings of the Twelfth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2006

2005
cis-Regulatory Element Prediction in Mammalian Genomes.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, 2005


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