David J. Arenillas

According to our database1, David J. Arenillas authored at least 13 papers between 2006 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

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Bibliography

2023
OnTarget: <i>in silico</i> design of MiniPromoters for targeted delivery of expression.
Nucleic Acids Res., July, 2023

2018
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework.
Nucleic Acids Res., 2018

2017
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals.
Nucleic Acids Res., 2017

2016
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2016

CAGEd-oPOSSUM: motif enrichment analysis from CAGE-derived TSSs.
Bioinform., 2016

2014
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2014

2011
Validation of Skeletal Muscle <i>cis</i>-Regulatory Module Predictions Reveals Nucleotide Composition Bias in Functional Enhancers.
PLoS Comput. Biol., 2011

MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model.
BMC Bioinform., 2011

2010
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.
Nucleic Acids Res., 2010

2009
The PAZAR database of gene regulatory information coupled to the ORCA toolkit for the study of regulatory sequences.
Nucleic Acids Res., 2009

2008
In Silico Detection of Sequence Variations Modifying Transcriptional Regulation.
PLoS Comput. Biol., 2008

2007
oPOSSUM: integrated tools for analysis of regulatory motif over-representation.
Nucleic Acids Res., 2007

2006
Identification of Over-Represented Combinations of Transcription Factor Binding Sites in Sets of Co-Expressed Genes.
Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006


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