David R. Kelley

According to our database, David R. Kelley authored at least 5 papers between 2010 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Interpreting the CTCF-mediated sequence grammar of genome folding with AkitaV2.

Paulina N. Smaruj, Fahad Kamulegeya, David R. Kelley, Geoffrey Fudenberg

PLoS Comput. Biol., 2025

2024

How to Build the Virtual Cell with Artificial Intelligence: Priorities and Opportunities.

Charlotte Bunne, Yusuf H. Roohani, Yanay Rosen, Ankit Gupta, Xikun Zhang, Marcel Roed, Theo Alexandrov, Mohammed AlQuraishi, Patricia Brennan, Daniel B. Burkhardt, Andrea Califano, Jonah Cool, Abby F. Dernburg, Kirsty Ewing, Emily B. Fox, Matthias Haury, Amy E. Herr, Eric Horvitz, Patrick D. Hsu, Viren Jain, Gregory R. Johnson, Thomas Kalil, David R. Kelley, Shana O. Kelley, Anna Kreshuk, Tim Mitchison, Stephani Otte, Jay Shendure, Nicolas J. Sofroniew, Fabian J. Theis, Christina V. Theodoris, Srigokul Upadhyayula, Marc Valer, Bo Wang, Eric Xing, Serena Yeung-Levy, Marinka Zitnik, Theofanis Karaletsos, Aviv Regev, Emma Lundberg, Jure Leskovec, Stephen R. Quake

CoRR, 2024

2020

Cross-species regulatory sequence activity prediction.

David R. Kelley

PLoS Comput. Biol., 2020

2011

Extracting Between-Pathway Models from E-MAP Interactions Using Expected Graph Compression.

David R. Kelley, Carl Kingsford

J. Comput. Biol., 2011

2010

Clustering metagenomic sequences with interpolated Markov models.

David R. Kelley, Steven L. Salzberg

BMC Bioinform., 2010