Aviv Regev

According to our database1, Aviv Regev authored at least 14 papers between 2001 and 2018.

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Bibliography

2018
Reconstructing probabilistic trees of cellular differentiation from single-cell RNA-seq data.
CoRR, 2018

BROCKMAN: deciphering variance in epigenomic regulators by k-mer factorization.
BMC Bioinform., 2018

2011
Physical Module Networks: an integrative approach for reconstructing transcription regulation.
Bioinformatics [ISMB/ECCB], 2011

Metabolic Network Analysis Demystified.
Proceedings of the Research in Computational Molecular Biology, 2011

2009
BRNI: Modular analysis of transcriptional regulatory programs.
BMC Bioinform., 2009

2007
Automatic genome-wide reconstruction of phylogenetic gene trees.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007

2006
MinReg: A Scalable Algorithm for Learning Parsimonious Regulatory Networks in Yeast and Mammals.
J. Mach. Learn. Res., 2006

2005
Learning Module Networks.
J. Mach. Learn. Res., 2005

2004
BioAmbients: an abstraction for biological compartments.
Theor. Comput. Sci., 2004

Inferring quantitative models of regulatory networks from expression data.
Proceedings of the Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, 2004

2002
Minreg: Inferring an active regulator set.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

2001
Application of a stochastic name-passing calculus to representation and simulation of molecular processes.
Inf. Process. Lett., 2001

Representation and Simulation of Biochemical Processes Using the pi-Calculus Process Algebra.
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001

Inferring subnetworks from perturbed expression profiles.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001


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