Dmitri G. Fedorov

According to our database1, Dmitri G. Fedorov authored at least 27 papers between 2002 and 2019.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2019
A systematic study of minima in alanine dipeptide.
J. Comput. Chem., 2019

2018
Analytic second derivatives for the efficient electrostatic embedding in the fragment molecular orbital method.
J. Comput. Chem., 2018

Implementation of replica-exchange umbrella sampling in GAMESS.
Comput. Phys. Commun., 2018

Planteome & BisQue: Automating Image Annotation with Ontologies using Deep-Learning Networks.
Proceedings of the 9th International Conference on Biological Ontology (ICBO 2018), 2018

2017
Three-body expansion of the fragment molecular orbital method combined with density-functional tight-binding.
J. Comput. Chem., 2017

Rapid and accurate assessment of GPCR-ligand interactions Using the fragment molecular orbital-based density-functional tight-binding method.
J. Comput. Chem., 2017

2016
The Fragment Molecular Orbital Method Reveals New Insight into the Chemical Nature of GPCR-Ligand Interactions.
J. Chem. Inf. Model., 2016

Plant Image Segmentation and Annotation with Ontologies in BisQue.
Proceedings of the Joint International Conference on Biological Ontology and BioCreative, 2016

2014
Marine Biodiversity Classification Using Dropout Regularization.
Proceedings of the 2014 ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, 2014

2013
Simultaneous cell tracking and image alignment in 3D CLSM imagery of growing Arabidopsis thaliana sepals.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

2012
Bisque: Advances in Bioimage Databases.
IEEE Data Eng. Bull., 2012

Heuristic static load-balancing algorithm applied to the fragment molecular orbital method.
Proceedings of the SC Conference on High Performance Computing Networking, 2012

2010
Energy gradients in combined fragment molecular orbital and polarizable continuum model (FMO/PCM) calculation.
J. Comput. Chem., 2010

Fragment molecular orbital study of the electronic excitations in the photosynthetic reaction center of <i>Blastochloris viridis</i>.
J. Comput. Chem., 2010

Bisque: a platform for bioimage analysis and management.
Bioinform., 2010

2009
A biosegmentation benchmark for evaluation of bioimage analysis methods.
BMC Bioinform., 2009

2008
Polarizable continuum model with the fragment molecular orbital-based time-dependent density functional theory.
J. Comput. Chem., 2008

2007
Change in a protein's electronic structure induced by an explicit solvent: An <i>ab initio</i> fragment molecular orbital study of ubiquitin.
J. Comput. Chem., 2007

Pair interaction energy decomposition analysis.
J. Comput. Chem., 2007

Accuracy of the three-body fragment molecular orbital method applied to Møller-Plesset perturbation theory.
J. Comput. Chem., 2007

2006
The polarizable continuum model (PCM) interfaced with the fragment molecular orbital method (FMO).
J. Comput. Chem., 2006

Towards automated bioimage analysis: from features to semantics.
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2006

Multi-Focus Imaging using Local Focus Estimation and Mosaicking.
Proceedings of the International Conference on Image Processing, 2006

2005
Ab initio fragment molecular orbital (FMO) method applied to analysis of the ligand-protein interaction in a pheromone-binding protein.
Comput. Biol. Chem., 2005

Full Electron Calculation Beyond 20, 000 Atoms: Ground Electronic State of Photosynthetic Proteins.
Proceedings of the ACM/IEEE SC2005 Conference on High Performance Networking and Computing, 2005

2004
A new hierarchical parallelization scheme: Generalized distributed data interface (GDDI), and an application to the fragment molecular orbital method (FMO).
J. Comput. Chem., 2004

2002
System for automatic registration of remote sensing images.
Proceedings of the IEEE International Geoscience and Remote Sensing Symposium, 2002


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