Filip Stefaniak

According to our database, Filip Stefaniak authored at least 7 papers between 2018 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Evaluation of single-template ligand-based methods for the discovery of small-molecule nucleic acid binders.

Dávid Bajusz, Anita Rácz, Janusz M. Bujnicki, Filip Stefaniak

Briefings Bioinform., 2025

2023

Structural interaction fingerprints and machine learning for predicting and explaining binding of small molecule ligands to RNA.

Natalia A Szulc, Zuzanna Mackiewicz, Janusz M. Bujnicki, Filip Stefaniak

Briefings Bioinform., July, 2023

2022

fingeRNAt - A novel tool for high-throughput analysis of nucleic acid-ligand interactions.

Natalia A Szulc, Zuzanna Mackiewicz, Janusz M. Bujnicki, Filip Stefaniak

PLoS Comput. Biol., 2022

MODOMICS: a database of RNA modification pathways. 2021 update.

Pietro Boccaletto, Filip Stefaniak, Angana Ray, Andrea Cappannini, Sunandan Mukherjee, Elzbieta Purta, Malgorzata Kurkowska, Niloofar Shirvanizadeh, Eliana Destefanis, Paula Groza, Gülben Avsar, Antonia Romitelli, Pinar Pir, Erik Dassi, Silvestro G. Conticello, Francesc Aguiló, Janusz M. Bujnicki

Nucleic Acids Res., 2022

2021

AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses.

Filip Stefaniak, Janusz M. Bujnicki

PLoS Comput. Biol., 2021

2020

RNAProbe: a web server for normalization and analysis of RNA structure probing data.

Tomasz K. Wirecki, Katarzyna Merdas, Agata Bernat, Michal J. Boniecki, Janusz M. Bujnicki, Filip Stefaniak

Nucleic Acids Res., 2020

2018

RNArchitecture: a database and a classification system of RNA families, with a focus on structural information.

Pietro Boccaletto, Marcin Magnus, Catarina Almeida, Adriana Zyla, Astha Astha, Radoslaw Pluta, Blazej Baginski, Elzbieta Jankowska, Stanislaw Dunin-Horkawicz, Tomasz K. Wirecki, Michal J. Boniecki, Filip Stefaniak, Janusz M. Bujnicki

Nucleic Acids Res., 2018