Francesco Bertoni

According to our database, Francesco Bertoni authored at least 11 papers between 2009 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

EasyCircR: Detection and reconstruction of circular RNAs post-transcriptional regulatory interaction networks.

Antonino Aparo, Simone Avesani, Luca Parmigiani, Sara Napoli, Francesco Bertoni, Vincenzo Bonnici, Luciano Cascione, Rosalba Giugno

Comput. Biol. Medicine, 2025

2021

RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis.

Alessandro La Ferlita, Salvatore Alaimo, Sebastiano Di Bella, Emanuele Martorana, Georgios I. Laliotis, Francesco Bertoni, Luciano Cascione, Philip N. Tsichlis, Alfredo Ferro, Roberta Bosotti, Alfredo Pulvirenti

BMC Bioinform., 2021

2019

A Reliable Method to Remove Batch Effects Maintaining Group Differences in Lymphoma Methylation Case Study.

Giulia Pontali, Luciano Cascione, Alberto J. Arribas, Andrea Rinaldi, Francesco Bertoni, Rosalba Giugno

Proceedings of the Bioinformatics and Biomedical Engineering, 2019

2018

Correction to: cuRnet: an R package for graph traversing on GPU.

Vincenzo Bonnici, Federico Busato, Stefano Aldegheri, Murodzhon Akhmedov, Luciano Cascione, Alberto Arribas Carmena, Francesco Bertoni, Nicola Bombieri, Ivo Kwee, Rosalba Giugno

BMC Bioinform., 2018

cuRnet: an R package for graph traversing on GPU.

Vincenzo Bonnici, Federico Busato, Stefano Aldegheri, Murodzhon Akhmedov, Luciano Cascione, Alberto Arribas Carmena, Francesco Bertoni, Nicola Bombieri, Ivo Kwee, Rosalba Giugno

BMC Bioinform., 2018

2017

PCSF: An R-package for network-based interpretation of high-throughput data.

Murodzhon Akhmedov, Amanda J. Kedaigle, Renan Escalante Chong, Roberto Montemanni, Francesco Bertoni, Ernest Fraenkel, Ivo Kwee

PLoS Comput. Biol., 2017

A Fast Prize-Collecting Steiner Forest Algorithm for Functional Analyses in Biological Networks.

Murodzhon Akhmedov, Alexander LeNail, Francesco Bertoni, Ivo Kwee, Ernest Fraenkel, Roberto Montemanni

Proceedings of the Integration of AI and OR Techniques in Constraint Programming, 2017

2016

Bayesian network data imputation with application to survival tree analysis.

Paola M. V. Rancoita, Marco Zaffalon, Emanuele Zucca, Francesco Bertoni, Cassio P. de Campos

Comput. Stat. Data Anal., 2016

2010

An integrated Bayesian analysis of LOH and copy number data.

Paola M. V. Rancoita, Marcus Hutter, Francesco Bertoni, Ivo Kwee

BMC Bioinform., 2010

2009

Bayesian DNA copy number analysis.

Paola M. V. Rancoita, Marcus Hutter, Francesco Bertoni, Ivo Kwee

BMC Bioinform., 2009

Bayesian Joint Estimation of CN and LOH Aberrations.

Paola M. V. Rancoita, Marcus Hutter, Francesco Bertoni, Ivo Kwee

Proceedings of the Distributed Computing, 2009