Gabriele Orlando

According to our database, Gabriele Orlando authored at least 16 papers between 2015 and 2026.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2026

Superradiant Quantum Phase Transition in Open Systems: System-Bath Interaction at the Critical Point.

Daniele Lamberto, Gabriele Orlando, Salvatore Savasta

Quantum, 2026

2025

Charting the structure-sequence landscape of light chain amyloids.

Gabriele Orlando, Rodrigo Gallardo, Alicia Colla, Joost Schymkowitz, Frederic Rousseau

Bioinform., 2025

<i>In silico</i> identification of archaeal DNA-binding proteins.

Linus Donvil, Joëlle A. J. Housmans, Eveline Peeters, Wim F. Vranken, Gabriele Orlando

Bioinform., 2025

FoldX force field revisited, an improved version.

Javier Delgado, Raul Reche, Damiano Cianferoni, Gabriele Orlando, Rob van der Kant, Frederic Rousseau, Joost Schymkowitz, Luis Serrano

Bioinform., 2025

2024

Integrating physics in deep learning algorithms: a force field as a PyTorch module.

Gabriele Orlando, Luis Serrano, Joost Schymkowitz, Frederic Rousseau

Bioinform., 2024

2022

Editorial: Towards genome interpretation: Computational methods to model the genotype-phenotype relationship.

Daniele Raimondi, Gabriele Orlando, Nora Verplaetse, Piero Fariselli, Yves Moreau

Frontiers Bioinform., 2022

2021

b2bTools: online predictions for protein biophysical features and their conservation.

Luciano Porto Kagami, Gabriele Orlando, Daniele Raimondi, François Ancien, Bhawna Dixit, Jose Gavaldá-García, Pathmanaban Ramasamy, Joel Roca-Martínez, Konstantina Tzavella, Wim F. Vranken

Nucleic Acids Res., 2021

In silico prediction of in vitro protein liquid-liquid phase separation experiments outcomes with multi-head neural attention.

Daniele Raimondi, Gabriele Orlando, Emiel Michiels, Donya Pakravan, Anna Bratek-Skicki, Ludo Van Den Bosch, Yves Moreau, Frederic Rousseau, Joost Schymkowitz

Bioinform., 2021

2020

Insight into the protein solubility driving forces with neural attention.

Daniele Raimondi, Gabriele Orlando, Piero Fariselli, Yves Moreau

PLoS Comput. Biol., 2020

ShiftCrypt: a web server to understand and biophysically align proteins through their NMR chemical shift values.

Gabriele Orlando, Daniele Raimondi, Luciano Porto Kagami, Wim F. Vranken

Nucleic Acids Res., 2020

Accurate prediction of protein beta-aggregation with generalized statistical potentials.

Gabriele Orlando, Alexandra Silva, Sandra Macedo-Ribeiro, Daniele Raimondi, Wim F. Vranken

Bioinform., 2020

2019

Computational identification of prion-like RNA-binding proteins that form liquid phase-separated condensates.

Gabriele Orlando, Daniele Raimondi, Francesco Tabaro, Francesco Codicè, Yves Moreau, Wim F. Vranken

Bioinform., 2019

2018

Ultra-fast global homology detection with Discrete Cosine Transform and Dynamic Time Warping.

Daniele Raimondi, Gabriele Orlando, Yves Moreau, Wim F. Vranken

Bioinform., 2018

2017

DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins.

Daniele Raimondi, Ibrahim Tanyalcin, Julien Ferté, Andrea M. Gazzo, Gabriele Orlando, Tom Lenaerts, Marianne Rooman, Wim F. Vranken

Nucleic Acids Res., 2017

SVM-dependent pairwise HMM: an application to protein pairwise alignments.

Gabriele Orlando, Daniele Raimondi, Taushif Khan, Tom Lenaerts, Wim F. Vranken

Bioinform., 2017

2015

Clustering-based model of cysteine co-evolution improves disulfide bond connectivity prediction and reduces homologous sequence requirements.

Daniele Raimondi, Gabriele Orlando, Wim F. Vranken

Bioinform., 2015