Gene J. Yu

According to our database, Gene J. Yu authored at least 20 papers between 2012 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2021

Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics.

Duy-Tan J. Pham, Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger

Frontiers Comput. Neurosci., 2021

2020

Topographic Organization of Correlation Along the Longitudinal and Transverse Axes in Rat Hippocampal CA3 Due to Excitatory Afferents.

Gene J. Yu, Jean-Marie C. Bouteiller, Theodore W. Berger

Frontiers Comput. Neurosci., 2020

A Computational Model of the Cholinergic Modulation of CA1 Pyramidal Cell Activity.

Adam Mergenthal, Jean-Marie C. Bouteiller, Gene J. Yu, Theodore W. Berger

Frontiers Comput. Neurosci., 2020

Generation of Granule Cell Dendritic Morphologies by Estimating the Spatial Heterogeneity of Dendritic Branching.

Zane Z. Chou, Gene J. Yu, Theodore W. Berger

Frontiers Comput. Neurosci., 2020

2019

Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study.

Gene J. Yu, Jean-Marie C. Bouteiller, Dong Song, Theodore W. Berger

IEEE Trans. Biomed. Eng., 2019

Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1.

Gene J. Yu, Zhicheng Feng, Theodore W. Berger

Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

2018

Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation.

Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie C. Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger

IEEE Trans. Biomed. Eng., 2018

Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations.

Eric Y. Hu, Gene J. Yu, Dong Song, Jean-Marie C. Bouteiller, Theodore W. Berger

Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018

Point Process Filtering Estimates of Branching Rate for Neural Dendritic Morphology Generation.

Zane Z. Chou, Gene J. Yu, Theodore W. Berger

Proceedings of the 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2018

2016

A Million-Plus Neuron Model of the Hippocampal Dentate Gyrus: Critical Role for Topography in Determining Spatiotemporal Network Dynamics.

Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger

IEEE Trans. Biomed. Eng., 2016

Place field detection using grid-based clustering in a large-scale computational model of the rat dentate gyrus.

Gene J. Yu, Dong Song, Theodore W. Berger

Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization.

Clayton S. Bingham, Kyle Loizos, Gene J. Yu, Andrew Gilbert, Jean-Marie Bouteiller, Dong Song, Gianluca Lazzi, Theodore W. Berger

Proceedings of the 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2016

2015

Topography-dependent spatio-temporal correlations in the entorhinal-dentate-CA3 circuit in a large-scale computational model of the Rat Hippocampus.

Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger

Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

A million-plus neuron model of the hippocampal dentate gyrus: Dependency of spatio-temporal network dynamics on topography.

Phillip J. Hendrickson, Gene J. Yu, Dong Song, Theodore W. Berger

Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014

Implementation of the excitatory entorhinal-dentate-CA3 topography in a large-scale computational model of the rat hippocampus.

Gene J. Yu, Dong Song, Theodore W. Berger

Proceedings of the 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2014

2013

The role of topography in the transformation of spatiotemporal patterns by a large-scale, biologically realistic model of the rat dentate gyrus.

Gene J. Yu, Phillip J. Hendrickson, Brian S. Robinson, Dong Song, Theodore W. Berger

Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

The contribution of relative activation levels between populations of cells to network activity in a large-scale biologically realistic model of the hippocampus.

Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger

Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

2012

Implementation of topographically constrained connectivity for a large-scale biologically realistic model of the hippocampus.

Gene J. Yu, Brian S. Robinson, Phillip J. Hendrickson, Dong Song, Theodore W. Berger

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Implementation of activity-dependent synaptic plasticity rules for a large-scale biologically realistic model of the hippocampus.

Brian S. Robinson, Gene J. Yu, Phillip J. Hendrickson, Dong Song, Theodore W. Berger

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012

Towards a large-scale biologically realistic model of the hippocampus.

Phillip J. Hendrickson, Gene J. Yu, Brian S. Robinson, Dong Song, Theodore W. Berger

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012