Heather J. Ruskin

According to our database1, Heather J. Ruskin authored at least 69 papers between 2000 and 2019.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2019
Improving Confidence in Simulations through the Application of Multiple Updating Strategies.
Proceedings of the 17th International Conference on High Performance Computing & Simulation, 2019

Efficient Computational Models for assessment of Spatial Infection Features.
Proceedings of the 17th International Conference on High Performance Computing & Simulation, 2019

Financial Time Series: Motif Discovery and Analysis Using VALMOD.
Proceedings of the Computational Science - ICCS 2019, 2019

2017
EpiGeNet: A Graph Database of Interdependencies Between Genetic and Epigenetic Events in Colorectal Cancer.
J. Comput. Biol., 2017

A Computational Lymph Tissue Model for Long Term HIV Infection Progression and Immune Fitness.
Proceedings of the 25th Irish Conference on Artificial Intelligence and Cognitive Science, Dublin, Ireland, December 7, 2017

2016
Applications of High Performance Algorithms to Large Scale Cellular Automata Frameworks Used in Pharmaceutical Modelling.
J. Cell. Autom., 2016

NTCIR-12 Lifelog Data Analytics.
Proceedings of the first Workshop on Lifelogging Tools and Applications, 2016

Finding Motifs in Large Personal Lifelogs.
Proceedings of the 7th Augmented Human International Conference, 2016

2014
Comparative analysis of asynchronous cellular automata in stochastic pharmaceutical modelling.
J. Comput. Sci., 2014

Random Matrix Ensembles of Time Correlation Matrices to Analyze Visual Lifelogs.
Proceedings of the MultiMedia Modeling - 20th Anniversary International Conference, 2014

Modelling Impact of Morphological Urban Structure and Cognitive Behaviour on Pedestrian Flows.
Proceedings of the Computational Science and Its Applications - ICCSA 2014 - 14th International Conference, Guimarães, Portugal, June 30, 2014

EGIA - Evolutionary Optimisation of Gene Regulatory Networks, an Integrative Approach.
Proceedings of the Complex Networks V, 2014

Building cross-scale models of epigenetic mechanisms.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

A computational analysis on methylation inhibition during intestinal cancer initiation.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

LogisticCrypt - A logistic model of intestinal crypt structure.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

2013
Automatically Detecting "Significant Events" on SenseCam.
Int. J. Wavelets Multiresolution Inf. Process., 2013

Interdependencies of Genetic and Epigenetic Events in a Computational Model for Colon Cancer Dynamics.
ERCIM News, 2013

Applying Random Matrix Theory Filters on SenseCam Images.
ERCIM News, 2013

Probabilistic Pharmaceutical Modelling: A Comparison Between Synchronous and Asynchronous Cellular Automata.
Proceedings of the Parallel Processing and Applied Mathematics, 2013

Multiscaled Cross-Correlation Dynamics on SenseCam Lifelogged Images.
Proceedings of the Advances in Multimedia Modeling, 19th International Conference, 2013

Methylation Inhibitors and Carcinogens in an Agent-Based Model for Colon Crypt Dynamics during Cancer Development.
Proceedings of the Seventh UKSim/AMSS European Modelling Symposium, 2013

Application of statistical physics for the identification of important events in visual lifelogs.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012
Integrating heterogeneous gene expression data for gene regulatory network modelling.
Theory Biosci., 2012

Agent-based Space-time Discrete Simulation of Urban Traffic Including Bicycles.
Proceedings of the 3rd International Conference on Ambient Systems, 2012

Microarrays - Innovative Standards in a Changing World: the Case for Cloud.
ERCIM News, 2012

Parallelisation strategies for large scale cellular automata frameworks in pharmaceutical modelling.
Proceedings of the 2012 International Conference on High Performance Computing & Simulation, 2012

Visual Experience for Recognising Human Activities.
Proceedings of the Evaluating AAL Systems Through Competitive Benchmarking, 2012

High-Performance Computing for Data Analytics.
Proceedings of the 16th IEEE/ACM International Symposium on Distributed Simulation and Real Time Applications, 2012

A computational model for genetic and epigenetic signals in colon cancer.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2012

A Cellular Automata-Based Network Model for Heterogeneous Traffic: Intersections, Turns and Their Connection.
Proceedings of the Cellular Automata, 2012

2011
Automatically Detecting "Significant Events" on SenseCam™.
ERCIM News, 2011

A Discrete Simulation Model for Traffic Including Bicycles on Urban Networks, Applied to Intersection of Two One-Way Streets.
Proceedings of the Parallel Processing and Applied Mathematics, 2011

A Discrete Flow Simulation Model for Urban Road Networks, with Application to Combined Car and Single-File Bicycle Traffic.
Proceedings of the Computational Science and Its Applications - ICCSA 2011, 2011

2010
Modelling Gene Regulatory Networks - An Integrative Approach.
ERCIM News, 2010

Drug Dissolution Modelling.
ERCIM News, 2010

Comparison of evolutionary algorithms in gene regulatory network model inference.
BMC Bioinform., 2010

Edge-Weighting of Gene Expression Graphs.
Adv. Complex Syst., 2010

2009
Seizure characterisation using frequency-dependent multivariate dynamics.
Comput. Biol. Medicine, 2009

Multiscaled Cross-Correlation Dynamics in Financial Time-Series.
Adv. Complex Syst., 2009

Visualization of Complex Biological Systems: An Immune Response Model Using OpenGL.
Proceedings of the Complex Sciences, 2009

Considerations for a Social and Geographical Framework for Agent-Based Epidemics.
Proceedings of the International Conference on Computational Aspects of Social Networks, 2009

From Bio-inspired Computing to E-Biology.
Proceedings of the Seventh International Conference on Creating, 2009

2008
3D Multi-agent models for protein release from PLGA spherical particles with complex inner morphologies.
Theory Biosci., 2008

Novel Database for Genetic and Epigenetic Mechanisms in Colon Cancer.
ERCIM News, 2008

Epigenetic Modelling.
ERCIM News, 2008

Techniques for clustering gene expression data.
Comput. Biol. Medicine, 2008

Response to the comments by Bernaschi et al. on 'Optimisation and parallelisation strategies for Monte Carlo simulation of HIV infection'.
Comput. Biol. Medicine, 2008

2007
The importance of boundary conditions in the simulation of dissolution in the USP dissolution apparatus.
Simul. Model. Pract. Theory, 2007

Performance Evaluation of Traffic at Urban Single-Lane Junctions and Roundabouts.
ERCIM News, 2007

Optimisation and parallelisation strategies for Monte Carlo simulation of HIV infection.
Comput. Biol. Medicine, 2007

2006
Probabilistic methods for drug dissolution. Part 2. Modelling a soluble binary drug delivery system dissolving in vitro.
Simul. Model. Pract. Theory, 2006

Probabilistic models for drug dissolution. Part 1. Review of Monte Carlo and stochastic cellular automata approaches.
Simul. Model. Pract. Theory, 2006

An Agent-Based Approach to Immune Modelling.
Proceedings of the Computational Science and Its Applications, 2006

Comparison of Homogeneous and Heterogeneous Motorised Traffic at Signalised and Two-Way Stop Control Single Lane Intersection.
Proceedings of the Computational Science and Its Applications, 2006

Simulation of Heterogeneous Motorised Traffic at a Signalised Intersection.
Proceedings of the Cellular Automata, 2006

2005
Network Emergence in Immune System Shape Space.
Proceedings of the Computational Science and Its Applications, 2005

2004
Diversity emergence and dynamics during primary immune response: a shape space, physical space model.
Theory Biosci., 2004

A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations.
Proceedings of the Computational Science and Its Applications, 2004

Multiple Parameterisation of Human Immune Response in HIV: Many-Cell Models.
Proceedings of the Computational Science and Its Applications, 2004

Network Topology in Immune System Shape Space.
Proceedings of the Computational Science, 2004

A Stochastic Model of the Effector T Cell Lifecycle.
Proceedings of the Cellular Automata, 2004

2003
Modelling Traffic Flow at a Multilane Intersection.
Proceedings of the Computational Science and Its Applications, 2003

A Model of Immune Suppression and Repertoire Evolution.
Proceedings of the Computational Science - ICCS 2003, 2003

2002
Effects of viral mutation on cellular dynamics in a monte carlo simulation of HIV immune response model in three dimensions.
Theory Biosci., 2002

Modeling Traffic Flow at an Urban Unsignalized Intersection.
Proceedings of the Computational Science - ICCS 2002, 2002

A Mesoscopic Approach to Modeling Immunological Memory.
Proceedings of the Computational Science - ICCS 2002, 2002

Virtual Phase Dynamics for Constrained Geometries in a Soap Froth.
Proceedings of the Computational Science - ICCS 2002, 2002

2000
A monte carlo approach to population dynamics of cells in a HIV immune response model.
Theory Biosci., 2000

Effect of mutation on helper T-cells and viral population: A computer simulation model for HIV.
Theory Biosci., 2000


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